RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CROCCP3Q8IVE0 287 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 EXD3Q8N9H8 876 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 OR11G2Q8NGC1 345 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 ZNF417Q8TAU3 575 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 LIPHQ8WWY8 451 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 SLC25A46Q96AG3 418 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 UBL7Q96S82 380 aaPredicted RBP6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 ZNF587Q96SQ5 575 aaPredicted RBP6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 SDHCQ99643 169 aaPredicted RBP6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 CMKLR1Q99788 373 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 TSPAN10Q9H1Z9 355 aaPredicted RBP6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 ZNF160Q9HCG1 818 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 ACOXLQ9NUZ1 547 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 CCDC59Q9P031 241 aaKnown RBP6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 GRHPRQ9UBQ7 328 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 PISDQ9UG56 409 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 BAIAP2Q9UQB8 552 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 EXPH5Q8NEV8 1989 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 PHF3Q92576 2039 aaKnown RBP6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 A0A1W2PRG6 482 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 IRGMA1A4Y4 181 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 HIST1H2ABP04908 130 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 F8A1P23610 371 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 SDHAP31040 664 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 CASP3P42574 277 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 POLR2HP52434 150 aaKnown RBP6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 C17orf67Q0P5P2 114 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 FOXF1Q12946 379 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 ACKR1Q16570 336 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 TMEM44Q2T9K0 475 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 Q6ZNX1 250 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 HIST3H2AQ7L7L0 130 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 VASH1Q7L8A9 365 aaPredicted RBP6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 GRINAQ7Z429 371 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 DTX3Q8N9I9 347 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 WDSUB1Q8N9V3 476 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 NEIL3Q8TAT5 605 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 ASB15Q8WXK1 588 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 GHSRQ92847 366 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 HIST1H2ACQ93077 130 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 PELI1Q96FA3 418 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 IMMP1LQ96LU5 166 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 KCTD7Q96MP8 289 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 GNRHR2Q96P88 292 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 GPX7Q96SL4 187 aaPredicted RBP6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 ABCB9Q9NP78 766 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 HAO2Q9NYQ3 351 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 GPN3Q9UHW5 284 aaPredicted RBP6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 LOXL2Q9Y4K0 774 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 DOCK10Q96BY6 2186 aa6.68□□□□□ -1.34
SRFBP1-201ENST00000339397 TRAV36DV7A0A075B6V5 113 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 A0A1W2PNR3 127 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 ANKRD61A6NGH8 418 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 DKK1O94907 266 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 MPZL1O95297 269 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 TCN2P20062 427 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 AZGP1P25311 298 aaKnown RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 SOX6P35712 828 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 RORCP51449 518 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 PPP5CP53041 499 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 OR10A3P58181 314 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 INSM1Q01101 510 aaPredicted RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 Q0VFX4 171 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 OR7A5Q15622 319 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 MEP1BQ16820 701 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 FAM69AQ5T7M9 428 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 STEAP3Q658P3 488 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 B3GNTL1Q67FW5 361 aaPredicted RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 TMPRSS11AQ6ZMR5 421 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 MDGA2Q7Z553 956 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 SLC35F2Q8IXU6 374 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 SNRNP27Q8WVK2 155 aaKnown RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 RNF166Q96A37 237 aaPredicted RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 TMCO6Q96DC7 493 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 PGLYRP3Q96LB9 341 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 AMELYQ99218 206 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 JAM3Q9BX67 310 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 MIXL1Q9H2W2 232 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 CDCP1Q9H5V8 836 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 METTL7AQ9H8H3 244 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 ETAA1Q9NY74 926 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 ZNF229Q9UJW7 825 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 GNG8Q9UK08 70 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 RPH3AQ9Y2J0 694 aaPredicted RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 CHCHD2Q9Y6H1 151 aaPredicted RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 COL27A1Q8IZC6 1860 aaPredicted RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 PCSK5Q92824 1860 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 ZNF318Q5VUA4 2279 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 A0A1B0GVC2 190 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 TRDV1A0A1B0GX56 115 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 A6NIN4 97 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 A8MVM7 634 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 FTCDNL1E5RQL4 147 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 MS4A18H0YCH9 400 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 CASKO14936 926 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 SSX4O60224 188 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 CBFA2T3O75081 653 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 RPP14O95059 124 aaKnown RBP6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 AKR7A3O95154 331 aa6.67□□□□□ -1.34
SRFBP1-201ENST00000339397 SNX4O95219 450 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms