RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ATP13A2Q9NQ11 1180 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 NRIP3Q9NQ35 241 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 EXOSC3Q9NQT5 275 aaKnown RBP9.85□□□□□ -0.83
RTN3-201ENST00000338850 FLRT3Q9NZU0 649 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 TEKT2Q9UIF3 430 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 ING4Q9UNL4 249 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 MOKQ9UQ07 419 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 MRPS33Q9Y291 106 aaKnown RBP9.85□□□□□ -0.83
RTN3-201ENST00000338850 AUP1Q9Y679 476 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 CLCA3PQ9Y6N3 262 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 ARHGEF17Q96PE2 2063 aaPredicted RBP9.85□□□□□ -0.83
RTN3-201ENST00000338850 RP1P56715 2156 aa9.85□□□□□ -0.83
RTN3-201ENST00000338850 SMG1Q96Q15 3661 aaKnown RBP9.84□□□□□ -0.83
RTN3-201ENST00000338850 A0A087WUJ7 227 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 LOC102723532A0A0G2JNH3 316 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 TEX51A0A1B0GUA7 166 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 LINC00854A0A1B0GVQ3 168 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 FOXS1O43638 330 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 PRAMEF2O60811 474 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 LDB3O75112 727 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 C1QL1O75973 258 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 OR2B3O76000 313 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 NTN1O95631 604 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 PPP1R3DO95685 299 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 TXNDC12O95881 172 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 PRB1P04280 392 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 CALCBP10092 127 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 EPXP11678 715 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 GABRA3P34903 492 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 GDI2P50395 445 aaKnown RBP9.84□□□□□ -0.83
RTN3-201ENST00000338850 MECP2P51608 486 aaKnown RBP9.84□□□□□ -0.83
RTN3-201ENST00000338850 AP3S2P59780 193 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 RPS7P62081 194 aaKnown RBP9.84□□□□□ -0.83
RTN3-201ENST00000338850 CXADRP78310 365 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 SIRPAP78324 504 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 KLF9Q13886 244 aaPredicted RBP9.84□□□□□ -0.83
RTN3-201ENST00000338850 GPR18Q14330 331 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 PRTGQ2VWP7 1150 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 KLHL12Q53G59 568 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 Q5BKY6 102 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 ALG10BQ5I7T1 473 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 EMC4Q5J8M3 183 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 CEP78Q5JTW2 689 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 LAMTOR1Q6IAA8 161 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 PCSK4Q6UW60 755 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 GKN2Q86XP6 184 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 C9orf62Q8N4C0 152 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 LSM14AQ8ND56 463 aaKnown RBP9.84□□□□□ -0.83
RTN3-201ENST00000338850 OR56B4Q8NH76 319 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 KCNE4Q8WWG9 221 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 SLC39A7Q92504 469 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 CNOT9Q92600 299 aaKnown RBP9.84□□□□□ -0.83
RTN3-201ENST00000338850 CCDC74AQ96AQ1 378 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 PELI1Q96FA3 418 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 ZNF285Q96NJ3 590 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 UTP23Q9BRU9 249 aaKnown RBP9.84□□□□□ -0.83
RTN3-201ENST00000338850 ENKD1Q9H0I2 346 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 MED28Q9H204 178 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 RERGLQ9H628 205 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 UCK1Q9HA47 277 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 PLSCR3Q9NRY6 295 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 WDR70Q9NW82 654 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 FBXL3Q9UKT7 428 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 POMT2Q9UKY4 750 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 SSUH2Q9Y2M2 353 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 ZNF337Q9Y3M9 751 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 PCDHGA9Q9Y5G4 932 aaKnown RBP9.84□□□□□ -0.83
RTN3-201ENST00000338850 ETV7Q9Y603 341 aa9.84□□□□□ -0.83
RTN3-201ENST00000338850 CCDC187A0A096LP49 1063 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 LOC105369274A0A096LPK9 316 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 OR5K3A6NET4 321 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 TTLL8A6PVC2 850 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 A8MV72 311 aaPredicted RBP9.83□□□□□ -0.84
RTN3-201ENST00000338850 CDRT15L2A8MXV6 281 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 E9PI62 339 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 KLK10O43240 276 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 SRPX2O60687 465 aaPredicted RBP9.83□□□□□ -0.84
RTN3-201ENST00000338850 CTNSO60931 367 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 OR7A10O76100 309 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 ZNF432O94892 652 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 TGM6O95932 706 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 PAHP00439 452 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 TNFP01375 233 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 TFP02787 698 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 TCRBP04435 133 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 RAB40ALP0C0E4 278 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 CT62P0C5K7 136 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 GKN3PP0CG01 181 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 SULT1A3P0DMM9 295 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 SULT1A4P0DMN0 295 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 TFPIP10646 304 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 RNH1P13489 461 aaKnown RBP9.83□□□□□ -0.84
RTN3-201ENST00000338850 AK4P27144 223 aaPredicted RBP9.83□□□□□ -0.84
RTN3-201ENST00000338850 MAPK3P27361 379 aaPredicted RBP9.83□□□□□ -0.84
RTN3-201ENST00000338850 NOS3P29474 1203 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 EMDP50402 254 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 UCNP55089 124 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 TMPRSS3P57727 454 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 OR12D2P58182 307 aa9.83□□□□□ -0.84
RTN3-201ENST00000338850 RPS11P62280 158 aaKnown RBP eCLIP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms