RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ANKK1Q8NFD2 765 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 OR4C15Q8NGM1 316 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 OR51A7Q8NH64 312 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 GIPC3Q8TF64 312 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 TMEM45BQ96B21 275 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 APH1AQ96BI3 265 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 FAM46AQ96IP4 442 aaKnown RBP10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 TNFRSF13CQ96RJ3 184 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 C12orf49Q9H741 205 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 TAS2R5Q9NYW4 299 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 SEC14L4Q9UDX3 406 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 FOXD3Q9UJU5 478 aaPredicted RBP10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 U3KQV3 271 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 MYO7BQ6PIF6 2116 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 A0A1W2PRG6 482 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 UNC119BA6NIH7 251 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 OR6C65A6NJZ3 312 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 HPRP00739 348 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 CGAP01215 116 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 AQP2P41181 271 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 GPR4P46093 362 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 OR3A2P47893 321 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 CLDN17P56750 224 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 PRPS1P60891 318 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 PPP1R8Q12972 351 aaKnown RBP10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 C1orf94Q6P1W5 598 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 LUZP2Q86TE4 346 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 MEX3DQ86XN8 651 aaKnown RBP10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 UBE2J2Q8N2K1 259 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 NRBF2Q96F24 287 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 ZNF385AQ96PM9 386 aaKnown RBP10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 RBM24Q9BX46 236 aaKnown RBP10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 OPN3Q9H1Y3 402 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 INIPQ9NRY2 104 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 ELOVL5Q9NYP7 299 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 JKAMPQ9P055 326 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 UPB1Q9UBR1 384 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 MGAT4BQ9UQ53 548 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 HIF3AQ9Y2N7 669 aa10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 KLF2Q9Y5W3 355 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1-202ENST00000337841 SMG1Q96Q15 3661 aaKnown RBP10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 NKX2-6A6NCS4 301 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 PTP4A3O75365 173 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 SLC43A1O75387 559 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 SERPINI2O75830 405 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 KRT33AO76009 404 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 CNOT4O95628 575 aaKnown RBP10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 BCL10O95999 233 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 GASTP01350 101 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 TSPAN19P0C672 248 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 GSTM3P21266 225 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 FPR3P25089 353 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 RPL4P36578 427 aaKnown RBP10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 POU3F1Q03052 451 aaPredicted RBP10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 RPL18Q07020 188 aaKnown RBP10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 TSPAN31Q12999 210 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 ATP6AP1Q15904 470 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 FBXL19-AS1Q494R0 122 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 ALG10Q5BKT4 473 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 FBXW9Q5XUX1 488 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 PGBD2Q6P3X8 592 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 NIPAL3Q6P499 406 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 CASP12Q6UXS9 341 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 SLC35D2Q76EJ3 337 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 KIF18BQ86Y91 864 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 ZNF454Q8N9F8 522 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 RELL2Q8NC24 303 aaPredicted RBP10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 OR10G2Q8NGC3 310 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 MOSPD2Q8NHP6 518 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 PYDC1Q8WXC3 89 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 STMN2Q93045 179 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 RNASE6Q93091 150 aaKnown RBP10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 ADAD1Q96M93 576 aaKnown RBP10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 ZNF556Q9HAH1 456 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 VNN3Q9NY84 501 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 PDP1Q9P0J1 537 aaPredicted RBP10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 B3GAT1Q9P2W7 334 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 RCE1Q9Y256 329 aa10.56□□□□□ -0.72
SPTLC1-202ENST00000337841 TRAV27A0A087WT01 109 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 ANKRD65E5RJM6 399 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 CDC42EP2O14613 210 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 TRAF3IP2O43734 574 aaPredicted RBP10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 ENTPD5O75356 428 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 NDUFB2O95178 105 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 F13BP05160 661 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 HLA-DOBP13765 273 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 ANXA8P13928 327 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 IFNGR1P15260 489 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 UQCRC1P31930 480 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 GSSP48637 474 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 PCYT1AP49585 367 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 DAP3P51398 398 aaKnown RBP10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 IST1P53990 364 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 CTXN1P60606 82 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 COX10Q12887 443 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 P2RY6Q15077 328 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 CDSNQ15517 529 aa10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 SHQ1Q6PI26 577 aaKnown RBP10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 ZNF474Q6S9Z5 364 aaPredicted RBP10.55□□□□□ -0.72
SPTLC1-202ENST00000337841 TFAP2EQ6VUC0 442 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms