RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 A0A1W2PR48 441 aa12.71□□□□□ -0.38
RTN4-202ENST00000337526 HCRTR1O43613 425 aa12.71□□□□□ -0.38
RTN4-202ENST00000337526 PDGFAP04085 211 aa12.71□□□□□ -0.38
RTN4-202ENST00000337526 MRPS21P82921 87 aaKnown RBP12.71□□□□□ -0.38
RTN4-202ENST00000337526 AQP6Q13520 282 aa12.71□□□□□ -0.38
RTN4-202ENST00000337526 MPEG1Q2M385 716 aa12.71□□□□□ -0.38
RTN4-202ENST00000337526 TRMT12Q53H54 448 aaKnown RBP12.71□□□□□ -0.38
RTN4-202ENST00000337526 ESCO2Q56NI9 601 aa12.71□□□□□ -0.38
RTN4-202ENST00000337526 PRSS45Q7RTY3 260 aa12.71□□□□□ -0.38
RTN4-202ENST00000337526 COMTD1Q86VU5 262 aa12.71□□□□□ -0.38
RTN4-202ENST00000337526 SUSD5O60279 629 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 PAPLNO95428 1278 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 NID1P14543 1247 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 PTBP1P26599 531 aaKnown RBP eCLIP12.7□□□□□ -0.381e-7■■■■□ 26.1
RTN4-202ENST00000337526 TEKQ02763 1124 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 SLC14A1Q13336 389 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 ASAH1Q13510 395 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 SVBPQ8N300 66 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 OR56B2PQ8NGI1 322 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 VN1R3Q9BXE9 311 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 TMEM59Q9BXS4 323 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 ULBP2Q9BZM5 246 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 TSPAN10Q9H1Z9 355 aaPredicted RBP12.7□□□□□ -0.38
RTN4-202ENST00000337526 ZMAT3Q9HA38 289 aaKnown RBP12.7□□□□□ -0.38
RTN4-202ENST00000337526 NTN4Q9HB63 628 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 DUSP22Q9NRW4 184 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 PTRH2Q9Y3E5 179 aaKnown RBP12.7□□□□□ -0.38
RTN4-202ENST00000337526 PLEKHM1Q9Y4G2 1056 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 TRIM64A6NGJ6 449 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 A6NL46 340 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 RFXAPO00287 272 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 IFNA17P01571 189 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 CD79AP11912 226 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 PKLRP30613 574 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 ZNF836Q6ZNA1 936 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 ESPNLQ6ZVH7 1005 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 RNF128Q8TEB7 428 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 LINC01599Q8WXQ3 324 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 RHNO1Q9BSD3 238 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 EMC7Q9NPA0 242 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 RP1P56715 2156 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 TRBV11-1A0A0K0K1C0 115 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 CTNSO60931 367 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 BTG1P62324 171 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 MLC1Q15049 377 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 CNN3Q15417 329 aaKnown RBP12.7□□□□□ -0.38
RTN4-202ENST00000337526 FAM57BQ71RH2 274 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 DNAAF1Q8NEP3 725 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 OR10K1Q8NGX5 313 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.7□□□□□ -0.38
RTN4-202ENST00000337526 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.7□□□□□ -0.38
RTN4-202ENST00000337526 A0A1W2PS29 197 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 TMX2-CTNND1H3BSU7 103 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 TMEM176BQ3YBM2 270 aaPredicted RBP12.7□□□□□ -0.38
RTN4-202ENST00000337526 RTL6Q6ICC9 239 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 VASH1Q7L8A9 365 aaPredicted RBP12.7□□□□□ -0.38
RTN4-202ENST00000337526 FRMD1Q8N878 549 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 ZFAND1Q8TCF1 268 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 RASD2Q96D21 266 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 GIMAP5Q96F15 307 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 LCORQ96JN0 433 aaPredicted RBP12.7□□□□□ -0.38
RTN4-202ENST00000337526 TMEM68Q96MH6 324 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 SDF2Q99470 211 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 CDH20Q9HBT6 801 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 NDUFB11Q9NX14 153 aa12.7□□□□□ -0.38
RTN4-202ENST00000337526 TTC3P53804 2025 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 TRBV5-4A0A0C4DH59 114 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 B4DXG7 233 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 MSX1P28360 303 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 S100A11P31949 105 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 SRP9P49458 86 aaKnown RBP12.69□□□□□ -0.38
RTN4-202ENST00000337526 EFNA3P52797 238 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 EPHA5P54756 1037 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 GPR176Q14439 515 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 CD276Q5ZPR3 534 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 FAHD1Q6P587 224 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 RAB3CQ96E17 227 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 FGF22Q9HCT0 170 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 SAGE1Q9NXZ1 904 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 EMC9Q9Y3B6 208 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 DDX60LQ5H9U9 1706 aaKnown RBP12.69□□□□□ -0.38
RTN4-202ENST00000337526 MAST2Q6P0Q8 1798 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 SURF4O15260 269 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 FCMRO60667 390 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 ADAM23O75077 832 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 ETHE1O95571 254 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 ELK1P19419 428 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 ETV6P41212 452 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 PEA15Q15121 130 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 GLYATL3Q5SZD4 288 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 MKXQ8IYA7 352 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 OR56B1Q8NGI3 324 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 OR14A16Q8NHC5 309 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 PFN4Q8NHR9 129 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 FAM3DQ96BQ1 224 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 SEC22CQ9BRL7 303 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 ZNF385DQ9H6B1 395 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 DAPP1Q9UN19 280 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 ETV7Q9Y603 341 aa12.69□□□□□ -0.38
RTN4-202ENST00000337526 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms