RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 WDR89Q96FK6 387 aaPredicted RBP14.87□□□□□ -0.03
NPHP3-201ENST00000337331 SCMH1Q96GD3 660 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 STARD5Q9NSY2 213 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 PCDHB10Q9UN67 800 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 CCL26Q9Y258 94 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 TRAV27A0A087WT01 109 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 FURINP09958 794 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 NFATC4Q14934 902 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 STEAP2Q8NFT2 490 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 SYNPRQ8TBG9 265 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 WNT2BQ93097 391 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 ENKD1Q9H0I2 346 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 PPP1R3EQ9H7J1 279 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 CXorf36Q9H7Y0 433 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 KCNIP3Q9Y2W7 256 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 SEC16AO15027 2179 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 TSPAN15O95858 294 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 F12P00748 615 aaPredicted RBP14.87□□□□□ -0.03
NPHP3-201ENST00000337331 GABRA1P14867 456 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 SLC18B1Q6NT16 456 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 DNAAF1Q8NEP3 725 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 FBLIM1Q8WUP2 373 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 C16orf58Q96GQ5 468 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 C4orf36Q96KX1 117 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 OR1F2PQ96R84 312 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 MEPEQ9NQ76 525 aaPredicted RBP14.87□□□□□ -0.03
NPHP3-201ENST00000337331 CYSLTR2Q9NS75 346 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 CAMK2AQ9UQM7 478 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 TMEM72A0PK05 275 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 A8MVJ9 347 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 FBXO24O75426 580 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 TIMP1P01033 207 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 CASRP41180 1078 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 ACTBP60709 375 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 ACTG1P63261 375 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 NKPD1Q17RQ9 610 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 CHRFAM7AQ494W8 412 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 TMEM164Q5U3C3 297 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 Q6ZTK2 550 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 SLC35F2Q8IXU6 374 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 KLHL15Q96M94 604 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 UNKLQ9H9P5 680 aaKnown RBP14.87□□□□□ -0.03
NPHP3-201ENST00000337331 PARPBPQ9NWS1 579 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 TP53I11O14683 189 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 IGF2P01344 180 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 WNT1P04628 370 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 HOXB1P14653 301 aaPredicted RBP14.86□□□□□ -0.03
NPHP3-201ENST00000337331 DCST2Q5T1A1 773 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 RTN4RL1Q86UN2 441 aaPredicted RBP14.86□□□□□ -0.03
NPHP3-201ENST00000337331 TMEM151BQ8IW70 566 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 PGAM5Q96HS1 289 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 TCEAL2Q9H3H9 227 aaPredicted RBP14.86□□□□□ -0.03
NPHP3-201ENST00000337331 ABRACLQ9P1F3 81 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 HCFC2Q9Y5Z7 792 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 A0A1B0GV90 55 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 TMEM129A0AVI4 362 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 VSTM2BA6NLU5 285 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 RPL34P49207 117 aaKnown RBP14.86□□□□□ -0.03
NPHP3-201ENST00000337331 TRA2BP62995 288 aaKnown RBP14.86□□□□□ -0.03
NPHP3-201ENST00000337331 KIR2DS3Q14952 304 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 RGS7BPQ6MZT1 257 aaPredicted RBP14.86□□□□□ -0.03
NPHP3-201ENST00000337331 OR13C3Q8NGS6 347 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 SHDQ96IW2 340 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 DKKL1Q9UK85 242 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 ENTPD2Q9Y5L3 495 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 KCNMB2Q9Y691 235 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 SULT1A3P0DMM9 295 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 SULT1A4P0DMN0 295 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 AKR1C4P17516 323 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 EIF2S3P41091 472 aaKnown RBP14.86□□□□□ -0.03
NPHP3-201ENST00000337331 MAGEB1P43366 347 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 PRPS1P60891 318 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 FAM83HQ6ZRV2 1179 aaPredicted RBP14.86□□□□□ -0.03
NPHP3-201ENST00000337331 KATNBL1Q9H079 304 aa14.86□□□□□ -0.03
NPHP3-201ENST00000337331 C17orf113A0A1B0GUU1 675 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 SUSD5O60279 629 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 ERCC1P07992 297 aaPredicted RBP14.85□□□□□ -0.03
NPHP3-201ENST00000337331 PCP4P48539 62 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 AFF3P51826 1226 aaKnown RBP14.85□□□□□ -0.03
NPHP3-201ENST00000337331 PLGLB1Q02325 96 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 ACVR1Q04771 509 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 TSPAN31Q12999 210 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 NCMAPQ5T1S8 102 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 TFAP2EQ6VUC0 442 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 TPRA1Q86W33 373 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 RBM45Q8IUH3 476 aaKnown RBP14.85□□□□□ -0.03
NPHP3-201ENST00000337331 PRR22Q8IZ63 422 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 INSM2Q96T92 566 aaPredicted RBP14.85□□□□□ -0.03
NPHP3-201ENST00000337331 HRASLSQ9HDD0 168 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 ISYNA1Q9NPH2 558 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 TCAPO15273 167 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 DUX1O43812 170 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 ATP1B1P05026 303 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 AMY2BP19961 511 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 SDHAP31040 664 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 IRF4Q15306 451 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 RBMS2Q15434 407 aaKnown RBP14.85□□□□□ -0.03
NPHP3-201ENST00000337331 RBMS3Q6XE24 437 aaKnown RBP14.85□□□□□ -0.03
NPHP3-201ENST00000337331 ABHD4Q8TB40 342 aa14.85□□□□□ -0.03
NPHP3-201ENST00000337331 GPR148Q8TDV2 347 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms