RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TOMM40LQ969M1 308 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 RAB3CQ96E17 227 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 TAPBPLQ9BX59 468 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 SUCNR1Q9BXA5 334 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 PRO1933Q9H354 126 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 A0A087WZY1 265 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 GABRA1P14867 456 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 GUCA2AQ02747 115 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 ACY1Q03154 408 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 IHHQ14623 411 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 OR4C15Q8NGM1 316 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 OR13C3Q8NGS6 347 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 PFN4Q8NHR9 129 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 C2orf15Q8WU43 125 aaKnown RBP12.25□□□□□ -0.45
COL2A1-201ENST00000337299 SCMH1Q96GD3 660 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 SOX1O00570 391 aaPredicted RBP12.25□□□□□ -0.45
COL2A1-201ENST00000337299 SRPX2O60687 465 aaPredicted RBP12.25□□□□□ -0.45
COL2A1-201ENST00000337299 CRYBA1P05813 215 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 JMJD7P0C870 316 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 SULT1A3P0DMM9 295 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 SULT1A4P0DMN0 295 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 RNH1P13489 461 aaKnown RBP12.25□□□□□ -0.45
COL2A1-201ENST00000337299 ZNF44P15621 663 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 CAV2P51636 162 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 HTRA4P83105 476 aaPredicted RBP12.25□□□□□ -0.45
COL2A1-201ENST00000337299 TEAD2Q15562 447 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 OTPQ5XKR4 325 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 ZC3HAV1LQ96H79 300 aaKnown RBP12.25□□□□□ -0.45
COL2A1-201ENST00000337299 TSPAN10Q9H1Z9 355 aaPredicted RBP12.25□□□□□ -0.45
COL2A1-201ENST00000337299 MPIG6BO95866 241 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 ANKRD34CP0C6C1 535 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 MGMTP16455 207 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 RPS27P42677 84 aaKnown RBP12.25□□□□□ -0.45
COL2A1-201ENST00000337299 HOXA1P49639 335 aaPredicted RBP12.25□□□□□ -0.45
COL2A1-201ENST00000337299 RSU1Q15404 277 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 CHRFAM7AQ494W8 412 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 ACTBL2Q562R1 376 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 GPR157Q5UAW9 335 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 GLDNQ6ZMI3 551 aaPredicted RBP12.25□□□□□ -0.45
COL2A1-201ENST00000337299 SLC35D2Q76EJ3 337 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 ACOT4Q8N9L9 421 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 PLPP7Q8NBV4 271 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 OR4C16Q8NGL9 310 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 PPP1R1CQ8WVI7 109 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 DPEP2Q9H4A9 486 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 SPACA1Q9HBV2 294 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 CDK5RAP2Q96SN8 1893 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 SMCO3A2RU48 225 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 DCTN6O00399 190 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 ADAMTS4O75173 837 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 C1orf105O95561 183 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 CD63P08962 238 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 GLP1RP43220 463 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 SLC6A9P48067 706 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 TM4SF4P48230 202 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 POU3F4P49335 361 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 MMP15P51511 669 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 MBOAT2Q6ZWT7 520 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 HIST2H3AQ71DI3 136 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 OR14C36Q8NHC7 312 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 ST6GALNAC5Q9BVH7 336 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 INPP5EQ9NRR6 644 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 MED17Q9NVC6 651 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 PPP4R1LQ9P1A2 415 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 KIAA0355O15063 1070 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 SELENOFO60613 162 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 PAPLNO95428 1278 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 NTN1O95631 604 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 IGLV3-25P01717 112 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 FPR3P25089 353 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 SEC13P55735 322 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 C4orf17Q53FE4 359 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 MRPL2Q5T653 305 aaKnown RBP12.24□□□□□ -0.45
COL2A1-201ENST00000337299 SLC16A9Q7RTY1 509 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 HSD17B13Q7Z5P4 300 aaPredicted RBP12.24□□□□□ -0.45
COL2A1-201ENST00000337299 MRPL10Q7Z7H8 261 aaKnown RBP12.24□□□□□ -0.45
COL2A1-201ENST00000337299 PRRT1Q99946 306 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 CNTNAP3Q9BZ76 1288 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 A4GALTQ9NPC4 353 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 FBXO7Q9Y3I1 522 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 IGLV3-10A0A075B6K4 115 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 OR5K3A6NET4 321 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 MRPL19P49406 292 aaKnown RBP12.24□□□□□ -0.45
COL2A1-201ENST00000337299 AGFG1P52594 562 aaKnown RBP12.24□□□□□ -0.45
COL2A1-201ENST00000337299 PLA1AQ53H76 456 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 KCTD18Q6PI47 426 aaPredicted RBP12.24□□□□□ -0.45
COL2A1-201ENST00000337299 PLA2G15Q8NCC3 412 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 GPR32P1Q8NGA4 272 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 OR6S1Q8NH40 331 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 GHITMQ9H3K2 345 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 CSAG2Q9Y5P2 127 aa12.24□□□□□ -0.45
COL2A1-201ENST00000337299 PHOX2AO14813 284 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 GPRIN2O60269 458 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 F13BP05160 661 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 NPPBP16860 134 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 HSD17B2P37059 387 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 SLC6A12P48065 614 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 CLDN6P56747 220 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 UBE2KP61086 200 aa12.23□□□□□ -0.45
COL2A1-201ENST00000337299 IRF4Q15306 451 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms