RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 TMEM164Q5U3C3 297 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 ULK3Q6PHR2 472 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 MS4A15Q8N5U1 240 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 TMEM99Q8N816 258 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 OR5J2Q8NH18 312 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 RBM24Q9BX46 236 aaKnown RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 ZNF471Q9BX82 626 aaPredicted RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 ULBP3Q9BZM4 244 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 ATG5Q9H1Y0 275 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 SYT4Q9H2B2 425 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 SDHAF2Q9NX18 166 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 FBXL2Q9UKC9 423 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 GPR55Q9Y2T6 319 aaPredicted RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 SIT1Q9Y3P8 196 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 NUBP2Q9Y5Y2 271 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 TP53BP1Q12888 1972 aaPredicted RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 F5H5K5 113 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 TOR1AO14656 332 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 ECDO95905 644 aaPredicted RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 H2BFMP0C1H6 154 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 PIPP12273 146 aaPredicted RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 ANXA7P20073 488 aaKnown RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 CD1CP29017 333 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 GDNFP39905 211 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 OR3A2P47893 321 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 PLGLB1Q02325 96 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 NKPD1Q17RQ9 610 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 COL28A1Q2UY09 1125 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 SLC6A19Q695T7 634 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 FBXO42Q6P3S6 717 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 ARHGAP11AQ6P4F7 1023 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 Q7L0L9 218 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 RTL10Q7L3V2 364 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 MARCH3Q86UD3 253 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 TDHQ8IZJ6 230 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 FAM26EQ8N5C1 309 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 OR11H7Q8NGC8 314 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 GHSRQ92847 366 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 FBXW5Q969U6 566 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 RNF170Q96K19 258 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 WDFY2Q96P53 400 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 ABHD1Q96SE0 405 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 AIFM2Q9BRQ8 373 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 TRAF4Q9BUZ4 470 aaPredicted RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 EMC6Q9BV81 110 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 SEMA4CQ9C0C4 833 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 FAM60AQ9NP50 221 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 IFT46Q9NQC8 304 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 HINT3Q9NQE9 182 aaKnown RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 MMP17Q9ULZ9 603 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 PPIL1Q9Y3C6 166 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 PTRH2Q9Y3E5 179 aaKnown RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 NYNRINQ9P2P1 1898 aaKnown RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 A0A1B0GVI7 797 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 OR5K3A6NET4 321 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 TRABD2BA6NFA1 517 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 VSTM2BA6NLU5 285 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 P2RX6O15547 441 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 ZNF749O43361 778 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 CREBL2O60519 120 aaPredicted RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 PPM1BO75688 479 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 LGI1O95970 557 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 SOD1P00441 154 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 CFDP00746 253 aaPredicted RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 ENPP1P22413 925 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 FAUP35544 74 aaKnown RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 PTH2RP49190 550 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 YPEL5P62699 121 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 EEF1A2Q05639 463 aaKnown RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 MELKQ14680 651 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 ZNF628Q5EBL2 1059 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 KCTD9Q7L273 389 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 OR11H4Q8NGC9 324 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 OR6M1Q8NGM8 313 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 ACOT12Q8WYK0 555 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 FAM71F1Q96KD3 344 aaPredicted RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 BMFQ96LC9 184 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 OR2M2Q96R28 347 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 SIGLEC11Q96RL6 698 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 GPA33Q99795 319 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 MARVELD1Q9BSK0 173 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 TEX101Q9BY14 249 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 OR51B6Q9H340 312 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 CHMP1AQ9HD42 196 aaPredicted RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 PCDHB16Q9NRJ7 776 aa5.96□□□□□ -1.46
HMG20A-201ENST00000336216 VSX1Q9NZR4 365 aaPredicted RBP5.96□□□□□ -1.46
HMG20A-201ENST00000336216 C5orf42Q9H799 3197 aa5.95□□□□□ -1.46
HMG20A-201ENST00000336216 TRAV18A0A075B6X5 111 aa5.95□□□□□ -1.46
HMG20A-201ENST00000336216 C5orf51A6NDU8 294 aa5.95□□□□□ -1.46
HMG20A-201ENST00000336216 DISC1C4P0D8 188 aa5.95□□□□□ -1.46
HMG20A-201ENST00000336216 GPR171O14626 319 aa5.95□□□□□ -1.46
HMG20A-201ENST00000336216 DNAJB6O75190 326 aa5.95□□□□□ -1.46
HMG20A-201ENST00000336216 PAPLNO95428 1278 aa5.95□□□□□ -1.46
HMG20A-201ENST00000336216 M6PRP20645 277 aa5.95□□□□□ -1.46
HMG20A-201ENST00000336216 CLRN1P58418 232 aa5.95□□□□□ -1.46
HMG20A-201ENST00000336216 AP3S2P59780 193 aa5.95□□□□□ -1.46
HMG20A-201ENST00000336216 FOXK2Q01167 660 aa5.95□□□□□ -1.46
HMG20A-201ENST00000336216 POU3F1Q03052 451 aaPredicted RBP5.95□□□□□ -1.46
HMG20A-201ENST00000336216 HTR4Q13639 388 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms