RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ERVMER34-1Q9H9K5 563 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 MMP25Q9NPA2 562 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 MRPS18AQ9NVS2 196 aaKnown RBP11.43□□□□□ -0.58
LIMK1-201ENST00000336180 CMAHPQ9Y471 501 aa11.43□□□□□ -0.58
LIMK1-201ENST00000336180 ACOD1A6NK06 481 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 OR2J2O76002 312 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 SLC2A5P22732 501 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 SOX2P48431 317 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 PSPHP78330 225 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 SLC25A35Q3KQZ1 300 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 ARHGAP11AQ6P4F7 1023 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 CCDC190Q86UF4 302 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 JAZF1Q86VZ6 243 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 METTL21AQ8WXB1 218 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 MMP28Q9H239 520 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 GSTK1Q9Y2Q3 226 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 ZNF337Q9Y3M9 751 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 FABP12A6NFH5 140 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 FAM25AB3EWG3 89 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 FAM25CB3EWG5 89 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 FAM25GB3EWG6 89 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 J3QRE1 110 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 SLC25A12O75746 678 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 PSKH1P11801 424 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 PSMD4P55036 377 aaKnown RBP11.42□□□□□ -0.58
LIMK1-201ENST00000336180 PON3Q15166 354 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 RHBDD2Q6NTF9 364 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 GDPD3Q7L5L3 318 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 PPP1R3BQ86XI6 285 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 WDFY1Q8IWB7 410 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 SLC35F2Q8IXU6 374 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 PPP1R14AQ96A00 147 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 GFM1Q96RP9 751 aaKnown RBP11.42□□□□□ -0.58
LIMK1-201ENST00000336180 ULBP3Q9BZM4 244 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 NXF2Q9GZY0 626 aaKnown RBP11.42□□□□□ -0.58
LIMK1-201ENST00000336180 TSPAN10Q9H1Z9 355 aaPredicted RBP11.42□□□□□ -0.58
LIMK1-201ENST00000336180 FKRPQ9H9S5 495 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 MED17Q9NVC6 651 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 SUSD2Q9UGT4 822 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 NPFFR2Q9Y5X5 522 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 V9GYH0 126 aa11.42□□□□□ -0.58
LIMK1-201ENST00000336180 TRAV6A0A075B6T7 132 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 A0A1W2PQ09 198 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 SUSD5O60279 629 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 TSPAN2O60636 221 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 SQSTM1Q13501 440 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 GALEQ14376 348 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 CORO6Q6QEF8 472 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 C1orf210Q8IVY1 113 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 UBALD2Q8IYN6 164 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 IZUMO1Q8IYV9 350 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 TMEM105Q8N8V8 129 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 OR10G3Q8NGC4 313 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 MR1Q95460 341 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 TSPAN32Q96QS1 320 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 OR14A2Q96R54 314 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 RPH3AQ9Y2J0 694 aaPredicted RBP11.41□□□□□ -0.58
LIMK1-201ENST00000336180 MRPS7Q9Y2R9 242 aaKnown RBP11.41□□□□□ -0.58
LIMK1-201ENST00000336180 MEN1O00255 615 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 MPZL1O95297 269 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 MT-ND5P03915 603 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 TFPIP10646 304 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 EDNRAP25101 427 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 DCDP81605 110 aaKnown RBP11.41□□□□□ -0.58
LIMK1-201ENST00000336180 ZXDAP98168 799 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 CD83Q01151 205 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 MDGA2Q7Z553 956 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 PRSS42Q7Z5A4 293 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 NRARPQ7Z6K4 114 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 ARIH2OSQ8N7S6 290 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 OR6N2Q8NGY6 317 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 OR14A16Q8NHC5 309 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 PELI1Q96FA3 418 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 ALG12Q9BV10 488 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 KLRF1Q9NZS2 232 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 GRHPRQ9UBQ7 328 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 IKZF2Q9UKS7 526 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 AK6Q9Y3D8 172 aaKnown RBP11.41□□□□□ -0.58
LIMK1-201ENST00000336180 HIST1H2ABP04908 130 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 FCER2P06734 321 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 GP1BBP13224 206 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 RBM34P42696 430 aaKnown RBP11.41□□□□□ -0.58
LIMK1-201ENST00000336180 CBX5P45973 191 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 CLDN12P56749 244 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 RAB25P57735 213 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 BTBD16Q32M84 506 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 MESTQ5EB52 335 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 CNIH2Q6PI25 160 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 HIST3H2AQ7L7L0 130 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 DPY19L4Q7Z388 723 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 HIST1H2ACQ93077 130 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 AMELYQ99218 206 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 CNN2Q99439 309 aaKnown RBP11.41□□□□□ -0.58
LIMK1-201ENST00000336180 PELOQ9BRX2 385 aaKnown RBP11.41□□□□□ -0.58
LIMK1-201ENST00000336180 EMC6Q9BV81 110 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 TRIM36Q9NQ86 728 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 ICAM5Q9UMF0 924 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 SPTBN2O15020 2390 aa11.41□□□□□ -0.58
LIMK1-201ENST00000336180 TMED7-TICAM2A0A0A6YYA0 188 aa11.4□□□□□ -0.58
LIMK1-201ENST00000336180 HLA-DPB1P04440 258 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms