RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 RCE1Q9Y256 329 aa13.52□□□□□ -0.25
UBA1-201ENST00000335972 TMEM150CB9EJG8 249 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 SCO2O43819 266 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 GALP22466 123 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 NR0B1P51843 470 aaKnown RBP13.51□□□□□ -0.25
UBA1-201ENST00000335972 FUT7Q11130 342 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 ZNF74Q16587 644 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 LIPNQ5VXI9 398 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 TCTE3Q8IZS6 198 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 TCTN2Q96GX1 697 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 SEMA4CQ9C0C4 833 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 PRDM9Q9NQV7 894 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 HLA-DQA2P01906 255 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 ACTA2P62736 377 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 ACTG2P63267 376 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 POU4F2Q12837 409 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 RPL22L1Q6P5R6 122 aaKnown RBP13.51□□□□□ -0.25
UBA1-201ENST00000335972 ZFAND1Q8TCF1 268 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 TAAR8Q969N4 342 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 DDOQ99489 341 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 DPAGT1Q9H3H5 408 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 LIN7BQ9HAP6 207 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 KLHL21Q9UJP4 597 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 EFCAB7A8K855 629 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 CDC40O60508 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
UBA1-201ENST00000335972 SRPX2O60687 465 aaPredicted RBP13.51□□□□□ -0.25
UBA1-201ENST00000335972 ZNF780AO75290 641 aaPredicted RBP13.51□□□□□ -0.25
UBA1-201ENST00000335972 ARL6IP5O75915 188 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 UCHL1P09936 223 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 GAAP10253 952 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 GDNFP39905 211 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 CSNK1EP49674 416 aaKnown RBP13.51□□□□□ -0.25
UBA1-201ENST00000335972 BLKP51451 505 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 PM20D2Q8IYS1 436 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 OR6V1Q8N148 313 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 PMEPA1Q969W9 287 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 KCTD12Q96CX2 325 aaKnown RBP13.51□□□□□ -0.25
UBA1-201ENST00000335972 LMAN1LQ9HAT1 526 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 PDE7BQ9NP56 450 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 SLC23A1Q9UHI7 598 aa13.51□□□□□ -0.25
UBA1-201ENST00000335972 TMA7Q9Y2S6 64 aaKnown RBP13.51□□□□□ -0.25
UBA1-201ENST00000335972 COL6A3P12111 3177 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 TRABD2BA6NFA1 517 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 AKR7A3O95154 331 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 PRKCAP17252 672 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 ERP29P30040 261 aaKnown RBP13.5□□□□□ -0.25
UBA1-201ENST00000335972 SSTR2P30874 369 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 SNTB2Q13425 540 aaKnown RBP13.5□□□□□ -0.25
UBA1-201ENST00000335972 NANOGNBQ7Z5D8 188 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 POMGNT2Q8NAT1 580 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 OR52I2Q8NH67 350 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 SLC2A12Q8TD20 617 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 CHIAQ9BZP6 476 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 OR10A4Q9H209 315 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 MRM2Q9UI43 246 aaKnown RBP13.5□□□□□ -0.25
UBA1-201ENST00000335972 GMEB2Q9UKD1 530 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 PLCL2Q9UPR0 1127 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 C1QBP02746 253 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 SLC37A1P57057 533 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 SKP2Q13309 424 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 TRAM1Q15629 374 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 CHRDL2Q6WN34 429 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 ATG4DQ86TL0 474 aaPredicted RBP13.5□□□□□ -0.25
UBA1-201ENST00000335972 OR11H4Q8NGC9 324 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 TSPAN32Q96QS1 320 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 MMP25Q9NPA2 562 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 UBQLN4Q9NRR5 601 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 GRHPRQ9UBQ7 328 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 MEIS3P1A6NDR6 274 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 ZNF879B4DU55 563 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 ZNF264O43296 627 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 GLCEO94923 617 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 DHFRP00374 187 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 HPXP02790 462 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 SQSTM1Q13501 440 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 ETFDHQ16134 617 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 MESTQ5EB52 335 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 WBP2NLQ6ICG8 309 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 RNF166Q96A37 237 aaPredicted RBP13.5□□□□□ -0.25
UBA1-201ENST00000335972 NUDT9Q9BW91 350 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 NPFFR2Q9Y5X5 522 aa13.5□□□□□ -0.25
UBA1-201ENST00000335972 RTTNQ86VV8 2226 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 SERPINA3P01011 423 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 PTBP1P26599 531 aaKnown RBP eCLIP13.49□□□□□ -0.256e-7■■■■■ 30.2
UBA1-201ENST00000335972 UBXN2BQ14CS0 331 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 ST3GAL2Q16842 350 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 GIMAP1Q8WWP7 306 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 OR51J1Q9H342 316 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 CUTCQ9NTM9 273 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 FRRS1LQ9P0K9 344 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 MGAT4AQ9UM21 535 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 IGHV1OR15-9A0A0B4J2B8 117 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 SSNA1O43805 119 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 PPM1BO75688 479 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 UBL3O95164 117 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 CD14P08571 375 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 ARL4DP49703 201 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 CCR5P51681 352 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 ZNF117Q03924 483 aa13.49□□□□□ -0.25
UBA1-201ENST00000335972 SLC25A38Q96DW6 304 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms