RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 UQCRC1P31930 480 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 GSSP48637 474 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 RPS4XP62701 263 aaKnown RBP12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 TSPAN31Q12999 210 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 FHL1Q13642 323 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 POU4F3Q15319 338 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZBED5Q49AG3 693 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 EEF1A1P5Q5VTE0 462 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 VWA1Q6PCB0 445 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 CREB3L2Q70SY1 520 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 NUFIP2Q7Z417 695 aaKnown RBP12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 PXKQ7Z7A4 578 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 HIPK1Q86Z02 1210 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 EPHX4Q8IUS5 362 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 LIX1LQ8IVB5 337 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 UEVLDQ8IX04 471 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 ICA1LQ8NDH6 482 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 SDCCAG3Q96C92 435 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 C12orf49Q9H741 205 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZNF629Q9UEG4 869 aaPredicted RBP12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 MGAT4BQ9UQ53 548 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 NOSIPQ9Y314 301 aaKnown RBP12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 NOX1Q9Y5S8 564 aa12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 MAGED1Q9Y5V3 778 aaPredicted RBP12.52□□□□□ -0.41
APOBEC3B-202ENST00000335760 SAC3D1A6NKF1 404 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 G3V2T6 193 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 PTP4A3O75365 173 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 IL18BPO95998 194 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 F13BP05160 661 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 TSPAN19P0C672 248 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 BMP5P22003 454 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 CHRNB4P30926 498 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 OPRM1P35372 400 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 POU3F1Q03052 451 aaPredicted RBP12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 ANKDD1AQ495B1 522 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 ALG10Q5BKT4 473 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 BTLAQ7Z6A9 289 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 GALNT5Q7Z7M9 940 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 MRGPRGQ86SM5 289 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZDHHC13Q8IUH4 622 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 PQLC1Q8N2U9 271 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZIC4Q8N9L1 334 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 OR6K3Q8NGY3 331 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 ASB5Q8WWX0 329 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 STARD4Q96DR4 205 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZNF385AQ96PM9 386 aaKnown RBP12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 DGCR6LQ9BY27 220 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 MCCC2Q9HCC0 563 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 FANCFQ9NPI8 374 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 INIPQ9NRY2 104 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 SIGLEC7Q9Y286 467 aa12.51□□□□□ -0.41
APOBEC3B-202ENST00000335760 H0YHG0 523 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 DVL2O14641 736 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 SMNDC1O75940 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 ADAP00813 363 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZNF26P17031 533 aaPredicted RBP12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 NTF4P34130 210 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 CLDN17P56750 224 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 PRPS1P60891 318 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 SRSF1Q07955 248 aaKnown RBP eCLIP12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 RCN1Q15293 331 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 TAF11Q15544 211 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 ANKRD34AQ69YU3 496 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 AAED1Q7RTV5 226 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 STK32CQ86UX6 486 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 IGFN1Q86VF2 1251 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 SVOPLQ8N434 492 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 ATG16L2Q8NAA4 619 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 ANKK1Q8NFD2 765 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 ITLN2Q8WWU7 325 aaPredicted RBP12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 TMEM45BQ96B21 275 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 TXNDC15Q96J42 360 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 NIPSNAP1Q9BPW8 284 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 UCK2Q9BZX2 261 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 NDEL1Q9GZM8 345 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZNF556Q9HAH1 456 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 KIF17Q9P2E2 1029 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 OAZ3Q9UMX2 235 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 PROCRQ9UNN8 238 aa12.5□□□□□ -0.41
APOBEC3B-202ENST00000335760 A0A1W2PRG6 482 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 TRAF3IP2O43734 574 aaPredicted RBP12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 MRPL33O75394 65 aaKnown RBP12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 NDUFB2O95178 105 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 ANXA8P13928 327 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 ANPEPP15144 967 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 IFNGR1P15260 489 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 GSTM3P21266 225 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 RPL4P36578 427 aaKnown RBP12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 CTXN1P60606 82 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 NIPAL3Q6P499 406 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 XKRXQ6PP77 449 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 SMARCD3Q6STE5 483 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 CASP12Q6UXS9 341 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 NHLRC1Q6VVB1 395 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 SLC35D2Q76EJ3 337 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZNF808Q8N4W9 903 aaPredicted RBP12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 LRRC75AQ8NAA5 344 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 RELL2Q8NC24 303 aaPredicted RBP12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 FANK1Q8TC84 345 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms