RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 ZBTB8AQ96BR9 441 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 SLC25A44Q96H78 314 aaPredicted RBP6.29□□□□□ -1.4
SF3B1-201ENST00000335508 TWSG1Q9GZX9 223 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 ABRACLQ9P1F3 81 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 A0A1W2PPL8 197 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 CDK2AP1O14519 115 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 EIF1AYO14602 144 aaKnown RBP6.29□□□□□ -1.4
SF3B1-201ENST00000335508 PRRG2O14669 202 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 SLC19A2O60779 497 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 CBX7O95931 251 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 ABOP16442 354 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 JUNBP17275 347 aaPredicted RBP6.29□□□□□ -1.4
SF3B1-201ENST00000335508 CLN3Q13286 438 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 PWWP2BQ6NUJ5 590 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 PXKQ7Z7A4 578 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 TOMM5Q8N4H5 51 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 NRG4Q8WWG1 115 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 FRMD6Q96NE9 622 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 NEDD4LQ96PU5 975 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 ZNF160Q9HCG1 818 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 ING4Q9UNL4 249 aa6.29□□□□□ -1.4
SF3B1-201ENST00000335508 SHROOM3Q8TF72 1996 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 A6NHS1 94 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 LRRN3E7EW58 273 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 ZNF780AO75290 641 aaPredicted RBP6.28□□□□□ -1.4
SF3B1-201ENST00000335508 RBBP9O75884 186 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 OR7A10O76100 309 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 GASTP01350 101 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 CSRP1P21291 193 aaKnown RBP6.28□□□□□ -1.4
SF3B1-201ENST00000335508 ENPP1P22413 925 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 CA5AP35218 305 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 LSSP48449 732 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 DAPP51397 102 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 SIRPAP78324 504 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 CNPY1Q3B7I2 92 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 ZNF813Q6ZN06 617 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 VASH1Q7L8A9 365 aaPredicted RBP6.28□□□□□ -1.4
SF3B1-201ENST00000335508 SAMD12Q8N8I0 201 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 GDPD1Q8N9F7 314 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 KCNE4Q8WWG9 221 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 BORCS8Q96FH0 119 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 TXNIPQ9H3M7 391 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 SNAPC5O75971 98 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 GLCEO94923 617 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 SLC2A2P11168 524 aaPredicted RBP6.28□□□□□ -1.4
SF3B1-201ENST00000335508 SRD5A2P31213 254 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 RGS19P49795 217 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 PSG6Q00889 435 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 GALK2Q01415 458 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 EMX1Q04741 257 aaPredicted RBP6.28□□□□□ -1.4
SF3B1-201ENST00000335508 FGFBP1Q14512 234 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 CSRP2Q16527 193 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 OR5M10Q6IEU7 315 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 SLC16A14Q7RTX9 510 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 DPY19L4Q7Z388 723 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 UBE3DQ7Z6J8 389 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 LSMEM1Q8N8F7 131 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 POGLUT1Q8NBL1 392 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 FAM173AQ9BQD7 235 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 LHPPQ9H008 270 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 SLC22A4Q9H015 551 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 RAB9BQ9NP90 201 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 TCFL5Q9UL49 500 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 A0A0B4J2E0 115 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 A0A1B0GX12 115 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 FAM183AA6NL82 134 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 DHHO43323 396 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 APOL3O95236 402 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 EML2O95834 649 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 CARD18P57730 90 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 CCDC58Q4VC31 144 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 OR2A2Q6IF42 318 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 KIRREL2Q6UWL6 708 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 NDUFAF7Q7L592 441 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 PM20D2Q8IYS1 436 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 MFSD8Q8NHS3 518 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 C8orf44Q96CB5 159 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 ZC3H10Q96K80 434 aaKnown RBP6.28□□□□□ -1.4
SF3B1-201ENST00000335508 TEAD3Q99594 435 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 ACTR6Q9GZN1 396 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 CHST11Q9NPF2 352 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 SIRT3Q9NTG7 399 aaPredicted RBP6.28□□□□□ -1.4
SF3B1-201ENST00000335508 LHX6Q9UPM6 363 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 IMPA2O14732 288 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 IL2RAP01589 272 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 GNAO1P09471 354 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 PPP5CP53041 499 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 RAC1P63000 192 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 Q499Y3 187 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 HES3Q5TGS1 186 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 PYHIN1Q6K0P9 492 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 APH1AQ96BI3 265 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 ABCG5Q9H222 651 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 IL20RAQ9UHF4 553 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 IGHV3-20A0A0C4DH32 117 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 TVP23AA6NH52 213 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 METTL15A6NJ78 407 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 SYT7O43581 403 aa6.28□□□□□ -1.4
SF3B1-201ENST00000335508 SORBS2O94875 1100 aaKnown RBP6.28□□□□□ -1.4
SF3B1-201ENST00000335508 WNT1P04628 370 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms