RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 BCKDHBP21953 392 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 CENPAP49450 140 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 EFR3AQ14156 821 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 GGTLC2Q14390 218 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 FAM122BQ7Z309 247 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 NANOGNBQ7Z5D8 188 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 C9orf40Q8IXQ3 194 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 OR6V1Q8N148 313 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 ASCC1Q8N9N2 400 aaKnown RBP17.21■□□□□ 0.35
RFTN1-201ENST00000334133 FAM174AQ8TBP5 190 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 ZNF721Q8TF20 911 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 GFI1Q99684 422 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 NKX3-1Q99801 234 aaPredicted RBP17.21■□□□□ 0.35
RFTN1-201ENST00000334133 TEKT2Q9UIF3 430 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 ARHGEF9O43307 516 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 RAD1O60671 282 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 ARL6IP5O75915 188 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 CD53P19397 219 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 SRMP19623 302 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 IL12BP29460 328 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 SLC6A1P30531 599 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 BTCP35070 178 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 MESTQ5EB52 335 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 LRRC69Q6ZNQ3 347 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 SIAH3Q8IW03 269 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 FAM71CQ8NEG0 241 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 OR6N2Q8NGY6 317 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 ADAMTS18Q8TE60 1221 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 TSPAN32Q96QS1 320 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 DPYSL5Q9BPU6 564 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 ULBP3Q9BZM4 244 aa17.21■□□□□ 0.35
RFTN1-201ENST00000334133 SERPINA3P01011 423 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 MT-ND4P03905 459 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 UCHL1P09936 223 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 PTBP1P26599 531 aaKnown RBP eCLIP17.2■□□□□ 0.34
RFTN1-201ENST00000334133 GIFP27352 417 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 HLA-DMAP28067 261 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 HNRNPKP61978 463 aaKnown RBP eCLIP17.2■□□□□ 0.34
RFTN1-201ENST00000334133 SLC36A2Q495M3 483 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 DPY19L4Q7Z388 723 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 BEST4Q8NFU0 473 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 HIF3AQ9Y2N7 669 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 A0A0A6YYJ9 748 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 AKR7A2O43488 359 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 ANKRD34CP0C6C1 535 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 PNMTP11086 282 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 LIPNQ5VXI9 398 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 ADIPOR1Q96A54 375 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 ZNF578Q96N58 590 aaPredicted RBP17.2■□□□□ 0.34
RFTN1-201ENST00000334133 ANKRD10Q9NXR5 420 aa17.2■□□□□ 0.34
RFTN1-201ENST00000334133 CDC40O60508 579 aaKnown RBP eCLIP17.19■□□□□ 0.34
RFTN1-201ENST00000334133 CSF2RBP32927 897 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 PYHIN1Q6K0P9 492 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 PM20D2Q8IYS1 436 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 TOMM5Q8N4H5 51 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 LRRC75AQ8NAA5 344 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 OR10AC1Q8NH08 325 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 THEM6Q8WUY1 208 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 YIPF5Q969M3 257 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 RNF166Q96A37 237 aaPredicted RBP17.19■□□□□ 0.34
RFTN1-201ENST00000334133 DACT3Q96B18 629 aaPredicted RBP17.19■□□□□ 0.34
RFTN1-201ENST00000334133 PHF21AQ96BD5 680 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 SLC46A1Q96NT5 459 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 NKIRAS2Q9NYR9 191 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 CTSFQ9UBX1 484 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 NPFFR2Q9Y5X5 522 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 MED12Q93074 2177 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 NDUFB5O43674 189 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 SLC43A1O75387 559 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 IGKV3-11P04433 115 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 YES1P07947 543 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 ASAH2BP0C7U1 165 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 TRAPPC2P0DI81 140 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 TRAPPC2BP0DI82 140 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 PLA1AQ53H76 456 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 ARHGAP40Q5TG30 622 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 HLA-DQA1Q5Y7H0 255 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 CMTM4Q8IZR5 234 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 KDM8Q8N371 416 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 PHF7Q9BWX1 381 aaPredicted RBP17.19■□□□□ 0.34
RFTN1-201ENST00000334133 EVA1AQ9H8M9 152 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 MRM2Q9UI43 246 aaKnown RBP17.19■□□□□ 0.34
RFTN1-201ENST00000334133 SLC6A5Q9Y345 797 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 IGHV1OR21-1A0A087WYE8 117 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 TRAV1-2A0A0B4J238 106 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 AKR7A3O95154 331 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 GUSBP08236 651 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 SDHAP31040 664 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 RRAS2P62070 204 aaPredicted RBP17.19■□□□□ 0.34
RFTN1-201ENST00000334133 HSD11B2P80365 405 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 COL13A1Q5TAT6 717 aaPredicted RBP17.19■□□□□ 0.34
RFTN1-201ENST00000334133 ZNF687Q8N1G0 1237 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 OR7G1Q8NGA0 311 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 ATOH1Q92858 354 aaPredicted RBP17.19■□□□□ 0.34
RFTN1-201ENST00000334133 AMELYQ99218 206 aa17.19■□□□□ 0.34
RFTN1-201ENST00000334133 BLACEA4D250 179 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 FITM1A5D6W6 292 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 FAM47E-STBD1D6RA91 191 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 H3BMH7 237 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms