RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 RNF44Q7L0R7 432 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 FGD2Q7Z6J4 655 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 GLRX5Q86SX6 157 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 CMIPQ8IY22 773 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 LSMEM1Q8N8F7 131 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 C1orf216Q8TAB5 229 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 RIT1Q92963 219 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 MOGAT1Q96PD6 335 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 DHRS9Q9BPW9 319 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 CLEC4MQ9H2X3 399 aaPredicted RBP11.24□□□□□ -0.61
VPS33B-201ENST00000333371 KCNK15Q9H427 330 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 SRA1Q9HD15 236 aaKnown RBP11.24□□□□□ -0.61
VPS33B-201ENST00000333371 CPNE7Q9UBL6 633 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 PCOLCE2Q9UKZ9 415 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 LRP4O75096 1905 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 AIPO00170 330 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 KHNYNO15037 678 aaKnown RBP11.24□□□□□ -0.61
VPS33B-201ENST00000333371 FOXS1O43638 330 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 AK1P00568 194 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 LCN1P31025 176 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 RBM34P42696 430 aaKnown RBP11.24□□□□□ -0.61
VPS33B-201ENST00000333371 CCR4P51679 360 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 AP2S1P53680 142 aaPredicted RBP11.24□□□□□ -0.61
VPS33B-201ENST00000333371 UBE2MP61081 183 aaKnown RBP11.24□□□□□ -0.61
VPS33B-201ENST00000333371 C1orf61Q13536 156 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 GGTLC2Q14390 218 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 TCTE1Q5JU00 501 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 TMEM69Q5SWH9 247 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 PWWP2BQ6NUJ5 590 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 C10orf53Q8N6V4 93 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 VSTM2LQ96N03 204 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 ALG12Q9BV10 488 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 ULBP3Q9BZM4 244 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 MGAT4CQ9UBM8 478 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 ZNF69Q9UC07 566 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 ZNF281Q9Y2X9 895 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 FREM3P0C091 2139 aa11.24□□□□□ -0.61
VPS33B-201ENST00000333371 A0A1B0GVI7 797 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 C17orf51A8MQB3 221 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 TEX46H3BTG2 121 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 SHOXO15266 292 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 KRT33AO76009 404 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 MAS1P04201 325 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 SLC35E2P0CK97 266 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 POU3F2P20265 443 aaPredicted RBP11.23□□□□□ -0.61
VPS33B-201ENST00000333371 MAOAP21397 527 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 NUDT1P36639 197 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 ADH7P40394 386 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 P2RX1P51575 399 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 STX4Q12846 297 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 ILF3Q12906 894 aaKnown RBP eCLIP11.23□□□□□ -0.61
VPS33B-201ENST00000333371 Q6ZSR6 202 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 GRAMD2AQ8IUY3 354 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 AVL9Q8NBF6 648 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 OR51A4Q8NGJ6 313 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 FOXN4Q96NZ1 517 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 ZNF576Q9H609 170 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 NOX3Q9HBY0 568 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 FOXJ3Q9UPW0 622 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 SPEF1Q9Y4P9 236 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 FKBP7Q9Y680 259 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 V9GY05 133 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 IGKV1D-42A0A075B6H8 117 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 A0A087WUJ7 227 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 MEIS3P1A6NDR6 274 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 C2CD4DB7Z1M9 353 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 TNFRSF10CO14798 259 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 CTDSPLO15194 276 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 SIX6O95475 246 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 SEMA4FO95754 770 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 CT45A8P0DMV1 189 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 CT45A9P0DMV2 189 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 GABRG2P18507 467 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 CXCL2P19875 107 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 ZNHIT3Q15649 155 aaPredicted RBP11.23□□□□□ -0.61
VPS33B-201ENST00000333371 CT45A2Q5DJT8 189 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 SEZ6L2Q6UXD5 910 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 STAC2Q6ZMT1 411 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 PARGQ86W56 976 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 SLC37A2Q8TED4 501 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 C3orf49Q96BT1 292 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 ELF4Q99607 663 aaPredicted RBP11.23□□□□□ -0.61
VPS33B-201ENST00000333371 ZNF224Q9NZL3 707 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 PIPOXQ9P0Z9 390 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 KLHL9Q9P2J3 617 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 UBQLN2Q9UHD9 624 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 ERVK-19Q9WJR5 959 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 NUP210LQ5VU65 1888 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 KIF26BQ2KJY2 2108 aa11.23□□□□□ -0.61
VPS33B-201ENST00000333371 TRAV8-7A0A075B6U6 113 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 C2orf74A8MZ97 194 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 GABARAPH6UMI1 98 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 M0R233 179 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 RAD1O60671 282 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 RAB38P57729 211 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 LGALS3BPQ08380 585 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 AANATQ16613 207 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 SFRP5Q5T4F7 317 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 YOD1Q5VVQ6 348 aaPredicted RBP11.22□□□□□ -0.61
VPS33B-201ENST00000333371 LIPNQ5VXI9 398 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms