RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SRPK3Q9UPE1 567 aa15.81■□□□□ 0.12
DDX28-201ENST00000332395 KHNYNO15037 678 aaKnown RBP15.8■□□□□ 0.12
DDX28-201ENST00000332395 TXNDC12O95881 172 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 EDNRAP25101 427 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 GRPRP30550 384 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 RHBDD2Q6NTF9 364 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 UBE2J2Q8N2K1 259 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 GRPEL2Q8TAA5 225 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 TRIM63Q969Q1 353 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 FKRPQ9H9S5 495 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 CYSLTR2Q9NS75 346 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 RXFP3Q9NSD7 469 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 TMA7Q9Y2S6 64 aaKnown RBP15.8■□□□□ 0.12
DDX28-201ENST00000332395 TRAV1-2A0A0B4J238 106 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 A0A1W2PPK0 400 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 TOX3O15405 576 aaPredicted RBP15.8■□□□□ 0.12
DDX28-201ENST00000332395 CDC40O60508 579 aaKnown RBP eCLIP15.8■□□□□ 0.12
DDX28-201ENST00000332395 HIST1H2ABP04908 130 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 CD1AP06126 327 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 YES1P07947 543 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 PGCP20142 388 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 RAB3BP20337 219 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 PSMB10P40306 273 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 RPS11P62280 158 aaKnown RBP eCLIP15.8■□□□□ 0.12
DDX28-201ENST00000332395 SLC25A35Q3KQZ1 300 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 TSSK4Q6SA08 328 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 ZNF574Q6ZN55 896 aaPredicted RBP15.8■□□□□ 0.12
DDX28-201ENST00000332395 HIST3H2AQ7L7L0 130 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 NOXA1Q86UR1 476 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 RDH10Q8IZV5 341 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 SAMD12Q8N8I0 201 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 ZNF511Q8NB15 262 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 STT3BQ8TCJ2 826 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 HIST1H2ACQ93077 130 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 TSPAN32Q96QS1 320 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 PDCD1LG2Q9BQ51 273 aa15.8■□□□□ 0.12
DDX28-201ENST00000332395 ZNF346Q9UL40 294 aaKnown RBP15.8■□□□□ 0.12
DDX28-201ENST00000332395 IGHV3-20A0A0C4DH32 117 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 B4DXG7 233 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 EIF4EP06730 217 aaKnown RBP15.79■□□□□ 0.12
DDX28-201ENST00000332395 EPHA8P29322 1005 aaPredicted RBP15.79■□□□□ 0.12
DDX28-201ENST00000332395 KIR2DL3P43628 341 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 MESTQ5EB52 335 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 EMC4Q5J8M3 183 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 LYSMD4Q5XG99 296 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 ENKURQ8TC29 256 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 SLC7A6Q92536 515 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 TGIF2Q9GZN2 237 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 MOKQ9UQ07 419 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 A0A0G2JMP0 313 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 A0A0X1KG70 313 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 H7C1C5 153 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 ARL6IP5O75915 188 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 EVI2BP34910 448 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 TALDO1P37837 337 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 DHPSP49366 369 aaPredicted RBP15.79■□□□□ 0.12
DDX28-201ENST00000332395 LCN6P62502 163 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 CBFBQ13951 182 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 SMUG1Q53HV7 270 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 Q5BKY6 102 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 OR4M2Q8NGB6 313 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 OR4M1Q8NGD0 313 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 TRMT10AQ8TBZ6 339 aaKnown RBP15.79■□□□□ 0.12
DDX28-201ENST00000332395 OR14A2Q96R54 314 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 NPFFR2Q9Y5X5 522 aa15.79■□□□□ 0.12
DDX28-201ENST00000332395 CACNA1EQ15878 2313 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 TRAV36DV7A0A075B6V5 113 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 CPED1A4D0V7 1026 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 PRR32B1ATL7 298 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 PSMD9O00233 223 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 AGRPO00253 132 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 DCTN6O00399 190 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 FADS1O60427 444 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 GATBO75879 557 aaKnown RBP15.78■□□□□ 0.12
DDX28-201ENST00000332395 WISP1O95388 367 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 PAHP00439 452 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 BGLAPP02818 100 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 UCHL1P09936 223 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 GP1BBP13224 206 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 MAP2K3P46734 347 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 C1QL3Q5VWW1 255 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 GUSBP11Q6P575 273 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 TRILQ7L0X0 811 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 SLC16A9Q7RTY1 509 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 DNAJA3Q96EY1 480 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 CDX2Q99626 313 aaPredicted RBP15.78■□□□□ 0.12
DDX28-201ENST00000332395 KCNJ15Q99712 375 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 SMAD5Q99717 465 aaKnown RBP15.78■□□□□ 0.12
DDX28-201ENST00000332395 DUSP23Q9BVJ7 150 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 SRA1Q9HD15 236 aaKnown RBP15.78■□□□□ 0.12
DDX28-201ENST00000332395 A0A0C4DFX4 3053 aa15.78■□□□□ 0.12
DDX28-201ENST00000332395 IDSB3KWA1 339 aa15.77■□□□□ 0.12
DDX28-201ENST00000332395 GPRIN2O60269 458 aa15.77■□□□□ 0.12
DDX28-201ENST00000332395 SLC25A12O75746 678 aa15.77■□□□□ 0.12
DDX28-201ENST00000332395 NPR2P20594 1047 aa15.77■□□□□ 0.12
DDX28-201ENST00000332395 RBMS1P29558 406 aaKnown RBP15.77■□□□□ 0.12
DDX28-201ENST00000332395 P2RX1P51575 399 aa15.77■□□□□ 0.12
DDX28-201ENST00000332395 RNF4P78317 190 aa15.77■□□□□ 0.12
DDX28-201ENST00000332395 C19orf57Q0VDD7 668 aa15.77■□□□□ 0.12
DDX28-201ENST00000332395 ZNF684Q5T5D7 378 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms