RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 RAB27BO00194 218 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 SHOXO15266 292 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 CALCBP10092 127 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 SLC2A1P11166 492 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 CDK4P11802 303 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 ICAM2P13598 275 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 ST6GAL1P15907 406 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 DCAF7P61962 342 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 DBPQ10586 325 aaPredicted RBP9.4□□□□□ -0.9
CHD3-201ENST00000330494 TMEM244Q5VVB8 128 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 ASTLQ6HA08 431 aaPredicted RBP9.4□□□□□ -0.9
CHD3-201ENST00000330494 ENTHD1Q8IYW4 607 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 CLEC2DQ9UHP7 191 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 LAMB2P55268 1798 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 MEGF11A6BM72 1044 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 ARHGAP33O14559 1287 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 ALOX12BO75342 701 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 APOOLQ6UXV4 268 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 DNAJC22Q8N4W6 341 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 GDPD1Q8N9F7 314 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 OR52I1Q8NGK6 324 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 GATA6Q92908 595 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 C3orf49Q96BT1 292 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 RPP25Q9BUL9 199 aaKnown RBP9.4□□□□□ -0.91
CHD3-201ENST00000330494 SUCNR1Q9BXA5 334 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 TSPAN10Q9H1Z9 355 aaPredicted RBP9.4□□□□□ -0.91
CHD3-201ENST00000330494 EHFQ9NZC4 300 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 ZNF281Q9Y2X9 895 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 LRP5O75197 1615 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 NUP214P35658 2090 aaPredicted RBP9.4□□□□□ -0.91
CHD3-201ENST00000330494 IGHV3-15A0A0B4J1V0 119 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 DLSTP36957 453 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 GPR139Q6DWJ6 353 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 ETFBKMTQ8IXQ9 262 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 MS4A6EQ96DS6 147 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 PLA2G2FQ9BZM2 168 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 PLEKHA3Q9HB20 300 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 LTB4R2Q9NPC1 389 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 A4GALTQ9NPC4 353 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 DUSP13Q9UII6 198 aa9.4□□□□□ -0.91
CHD3-201ENST00000330494 PAPPA2Q9BXP8 1791 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 CLDN24A6NM45 220 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 F5H5P2 479 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 ICMTO60725 284 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 MTHFD2P13995 350 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 TNFSF8P32971 234 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 SLC19A1P41440 591 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 MTCP1P56278 107 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 FAM71E1Q6IPT2 247 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 GPR155Q7Z3F1 870 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 OR4K15Q8NH41 348 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 HAO2Q9NYQ3 351 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 SNX11Q9Y5W9 270 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 ARGFXA6NJG6 315 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 GMDSO60547 372 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 IGLV3-27P01718 113 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 ENPP1P22413 925 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 CXADRP78310 365 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 SLC9A3R2Q15599 337 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 ZNF385BQ569K4 471 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 VASH1Q7L8A9 365 aaPredicted RBP9.39□□□□□ -0.91
CHD3-201ENST00000330494 NKAIN4Q8IVV8 208 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 PELI3Q8N2H9 469 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 CCDC71LQ8N9Z2 235 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 OR5L1Q8NGL2 311 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 MUCL1Q96DR8 90 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 ELMOD3Q96FG2 381 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 SLC46A1Q96NT5 459 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 CENPOQ9BU64 300 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 OR6C6A6NF89 314 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 CSO75390 466 aaKnown RBP9.39□□□□□ -0.91
CHD3-201ENST00000330494 PTAFRP25105 342 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 ADH6P28332 368 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 RAB4BP61018 213 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 ERVK-16P61578 105 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 TNK1Q13470 666 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 MFSD12Q6NUT3 480 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 LAX1Q8IWV1 398 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 CMTM1Q8IZ96 169 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 PARP16Q8N5Y8 322 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 ZNF610Q8N9Z0 462 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 TMEM185AQ8NFB2 350 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 TXNDC15Q96J42 360 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 CHST8Q9H2A9 424 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 B4DXG7 233 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 OR7C1O76099 320 aaPredicted RBP9.39□□□□□ -0.91
CHD3-201ENST00000330494 SLC35E2P0CK97 266 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 SSTR2P30874 369 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 IDH3GP51553 393 aaPredicted RBP9.39□□□□□ -0.91
CHD3-201ENST00000330494 EFNA3P52797 238 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 RPS18P62269 152 aaKnown RBP9.39□□□□□ -0.91
CHD3-201ENST00000330494 OR2T35Q8NGX2 323 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 SMAP2Q8WU79 429 aaPredicted RBP9.39□□□□□ -0.91
CHD3-201ENST00000330494 GHSRQ92847 366 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 OR5M11Q96RB7 305 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 TCEAL7Q9BRU2 100 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 NTN4Q9HB63 628 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 WSB2Q9NYS7 404 aaPredicted RBP9.39□□□□□ -0.91
CHD3-201ENST00000330494 WIF1Q9Y5W5 379 aa9.39□□□□□ -0.91
CHD3-201ENST00000330494 FZD7O75084 574 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms