RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 LCE4AQ5TA78 99 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 ATP1A1-AS1Q5TC04 95 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 PGBD2Q6P3X8 592 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 DEF8Q6ZN54 512 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 ZNF620Q6ZNG0 422 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 LCNL1Q6ZST4 164 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 NANOGNBQ7Z5D8 188 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 LNX2Q8N448 690 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 SIMC1Q8NDZ2 872 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 CPT1CQ8TCG5 803 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 TMEM54Q969K7 222 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 ZNF566Q969W8 418 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 BPIFA2Q96DR5 249 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 SLC38A2Q96QD8 506 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 EXO5Q9H790 373 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 MARCH7Q9H992 704 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 NANSQ9NR45 359 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 FBXO34Q9NWN3 711 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 AMDHD2Q9Y303 409 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 RRP15Q9Y3B9 282 aaKnown RBP2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 CACNA1GO43497 2377 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 HEATR5AQ86XA9 2040 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 OR2W5A6NFC9 320 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 KDM4EB2RXH2 506 aaPredicted RBP2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 M0R3H8 397 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 SULT2B1O00204 365 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 PLPP3O14495 311 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 TPST1O60507 370 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 EIF4EBP3O60516 100 aaPredicted RBP2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 SLC43A1O75387 559 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 TPOP07202 933 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 CD14P08571 375 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 PIPP12273 146 aaPredicted RBP2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 PAICSP22234 425 aaKnown RBP2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 MST1P26927 711 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 ACVR2AP27037 513 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 SDHAP31040 664 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 RYKP34925 604 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 VHLP40337 213 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 MAGEA5P43359 124 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 OR3A2P47893 321 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 P2RY4P51582 365 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 CARD18P57730 90 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 PUDPQ08623 228 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 MED21Q13503 144 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 GGTLC2Q14390 218 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 SNCBQ16143 134 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 HIST3H3Q16695 136 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 THEM4Q5T1C6 240 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 SLX4IPQ5VYV7 408 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 C12orf73Q69YU5 71 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 PODNL1Q6PEZ8 512 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 PCSK4Q6UW60 755 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 NHLRC1Q6VVB1 395 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 FCRLAQ7L513 359 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 TSEN54Q7Z6J9 526 aaKnown RBP2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 STK32CQ86UX6 486 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 UEVLDQ8IX04 471 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 CLEC4FQ8N1N0 589 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 LRRC75AQ8NAA5 344 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 ACBD4Q8NC06 268 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 OR4K5Q8NGD3 323 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 TEX47Q8TBZ9 253 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 THRSPQ92748 146 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 RFKQ969G6 155 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 TIMP4Q99727 224 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 APOL4Q9BPW4 351 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 POLDIP3Q9BY77 421 aaKnown RBP2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 ANKRA2Q9H9E1 313 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 NRIP3Q9NQ35 241 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 INIPQ9NRY2 104 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 MRPS18AQ9NVS2 196 aaKnown RBP2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 MED11Q9P086 117 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 FBXL2Q9UKC9 423 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 SIGLEC7Q9Y286 467 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 SH3GLB1Q9Y371 365 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 FLVCR1Q9Y5Y0 555 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 FKBP7Q9Y680 259 aa2.94□□□□□ -1.94
SCAMP1-201ENST00000320280 NUP214P35658 2090 aaPredicted RBP2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 A0A087WUU8 490 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 SLC22A23A1A5C7 686 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 SLC22A20A6NK97 555 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 ZAR1LA6NP61 321 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 FFAR1O14842 300 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 OR6A2O95222 327 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 PTHP01270 115 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 APOC1P02654 83 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 ALPLP05186 524 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 YES1P07947 543 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 NCK1P16333 377 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 DCTDP32321 178 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 DIO1P49895 249 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 ASCL1P50553 236 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 RPL27P61353 136 aaKnown RBP2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 LSM6P62312 80 aaKnown RBP2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 CDK5Q00535 292 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 EGR4Q05215 589 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 SF3A3Q12874 501 aaKnown RBP eCLIP2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 MYBPHQ13203 477 aa2.93□□□□□ -1.94
SCAMP1-201ENST00000320280 SRSF6Q13247 344 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms