RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ANKK1Q8NFD2 765 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 NUP37Q8NFH4 326 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 OR4F15Q8NGB8 312 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 SLC38A5Q8WUX1 472 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 ELAC2Q9BQ52 826 aaKnown RBP12.35□□□□□ -0.43
RPP40-201ENST00000319533 NELFAQ9H3P2 528 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 ZNF442Q9H7R0 627 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 CHODLQ9H9P2 273 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 CORO2BQ9UQ03 480 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 RASD1Q9Y272 281 aa12.35□□□□□ -0.43
RPP40-201ENST00000319533 A0A0G2JPF8 293 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 TMEM229AB2RXF0 380 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 HNRNPCL2B2RXH8 293 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 HNRNPCL3B7ZW38 293 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 C5orf58C9J3I9 102 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 FTCDNL1E5RQL4 147 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 RPL36A-HNRNPH2H7BZ11 118 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 ANGPT2O15123 496 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 FRS3O43559 492 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 HNRNPCL1O60812 293 aaKnown RBP12.34□□□□□ -0.43
RPP40-201ENST00000319533 STAMBPO95630 424 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 TGFAP01135 160 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 TACSTD2P09758 323 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 TFPTP0C1Z6 253 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 GKN3PP0CG01 181 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 HNRNPCL4P0DMR1 293 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 CALCRP30988 508 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 IDH3GP51553 393 aaPredicted RBP12.34□□□□□ -0.43
RPP40-201ENST00000319533 SH3BGRP55822 239 aaPredicted RBP12.34□□□□□ -0.43
RPP40-201ENST00000319533 UBE2NP61088 152 aaKnown RBP12.34□□□□□ -0.43
RPP40-201ENST00000319533 LGALS3BPQ08380 585 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 LARS2Q15031 903 aaKnown RBP12.34□□□□□ -0.43
RPP40-201ENST00000319533 RGNQ15493 299 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 RNF220Q5VTB9 566 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 C1orf140Q5VVS0 124 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 METTL21CQ5VZV1 264 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 ZNF836Q6ZNA1 936 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 SLC46A3Q7Z3Q1 461 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 PIGWQ7Z7B1 504 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 VRK2Q86Y07 508 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 OR52P1PQ8NH57 321 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 BCAS4Q8TDM0 211 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 STK35Q8TDR2 534 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 C10orf82Q8WW14 230 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 TMEM19Q96HH6 336 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 DOK1Q99704 481 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 VRK1Q99986 396 aaPredicted RBP12.34□□□□□ -0.43
RPP40-201ENST00000319533 KCNS3Q9BQ31 491 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 SOX7Q9BT81 388 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 TAPBPLQ9BX59 468 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 TMEM120AQ9BXJ8 343 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 BPESC1Q9GZL8 116 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 NSRP1Q9H0G5 558 aaKnown RBP12.34□□□□□ -0.43
RPP40-201ENST00000319533 ARMC7Q9H6L4 198 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 MRGBPQ9NV56 204 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.34□□□□□ -0.43
RPP40-201ENST00000319533 LEF1Q9UJU2 399 aaPredicted RBP12.34□□□□□ -0.43
RPP40-201ENST00000319533 CHST2Q9Y4C5 530 aa12.34□□□□□ -0.43
RPP40-201ENST00000319533 EVPLLA8MZ36 301 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 RRP9O43818 475 aaKnown RBP12.33□□□□□ -0.44
RPP40-201ENST00000319533 SNX3O60493 162 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 UPK3AO75631 287 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 KRT33AO76009 404 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 ZNF432O94892 652 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 COPZ1P61923 177 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 SRSF2Q01130 221 aaKnown RBP12.33□□□□□ -0.44
RPP40-201ENST00000319533 HGFACQ04756 655 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 BNIP2Q12982 314 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 CR1LQ2VPA4 569 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 PAGE3Q5JUK9 113 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 GCNT6Q5T4J0 391 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 PRAMEF8Q5VWM4 474 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 PRAMEF7Q5VXH5 474 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 SPATA21Q7Z572 469 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 CPLX4Q7Z7G2 160 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 MFSD8Q8NHS3 518 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 NEU4Q8WWR8 484 aaPredicted RBP12.33□□□□□ -0.44
RPP40-201ENST00000319533 HPS1Q92902 700 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 C3orf49Q96BT1 292 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 C1orf159Q96HA4 380 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 ALKBH3Q96Q83 286 aaPredicted RBP12.33□□□□□ -0.44
RPP40-201ENST00000319533 RAB1BQ9H0U4 201 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 A4GALTQ9NPC4 353 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 ADPRHL2Q9NX46 363 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 SLC25A37Q9NYZ2 338 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 ZNF232Q9UNY5 417 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 RCE1Q9Y256 329 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 ZNF443Q9Y2A4 671 aaPredicted RBP12.33□□□□□ -0.44
RPP40-201ENST00000319533 NDUFAF1Q9Y375 327 aa12.33□□□□□ -0.44
RPP40-201ENST00000319533 TMEM129A0AVI4 362 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 NDUFAB1O14561 156 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 LILRA1O75019 489 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 IGFBP1P08833 259 aaPredicted RBP12.32□□□□□ -0.44
RPP40-201ENST00000319533 BMP2P12643 396 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 PRG2P13727 222 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 CBR1P16152 277 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 HOXB9P17482 250 aaPredicted RBP12.32□□□□□ -0.44
RPP40-201ENST00000319533 ARFIP2P53365 341 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 CARTPTQ16568 116 aa12.32□□□□□ -0.44
RPP40-201ENST00000319533 IQCCQ4KMZ1 466 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms