RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 LSM5Q9Y4Y9 91 aaKnown RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 AHCTF1Q8WYP5 2266 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 SLC22A23A1A5C7 686 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 C1QTNF3-AMACRE9PGA6 284 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 PEX12O00623 359 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 CDC40O60508 579 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 AIFM1O95831 613 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 CSTAP01040 98 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 CD3DP04234 171 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 AKAIN1P0CW23 69 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 CD80P33681 288 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 MFSD13AQ14CX5 517 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 TRAM1Q15629 374 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 RAB11BQ15907 218 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 ETFDHQ16134 617 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 UBE2NLQ5JXB2 153 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 C1orf53Q5VUE5 145 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 OR1J4Q8NGS1 313 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 RSRP1Q9BUV0 290 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 KLF16Q9BXK1 252 aaPredicted RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 POFUT1Q9H488 388 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 ZFP64Q9NPA5 681 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 GRHPRQ9UBQ7 328 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 CGGBP1Q9UFW8 167 aaPredicted RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF346Q9UL40 294 aaKnown RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 PUS1Q9Y606 427 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 TDRD15B5MCY1 1934 aaKnown RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 KCNE1BA0A087WTH5 132 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 IGLON5A6NGN9 336 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 SOX1O00570 391 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 CTNSO60931 367 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 SNAPINO95295 136 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 LATS1O95835 1130 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 RENP00797 406 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF823P16415 610 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 SRMP19623 302 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 CXCL2P19875 107 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 TBXA2RP21731 343 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 MAOBP27338 520 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 GDI1P31150 447 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 CRYBA2P53672 197 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 NRG3P56975 720 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 SHC2P98077 582 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 DEFA6Q01524 100 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 DOC2BQ14184 412 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 MAPK14Q16539 360 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF674Q2M3X9 581 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ITPRIPL2Q3MIP1 535 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF805Q5CZA5 627 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 NKAPLQ5M9Q1 402 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 TPGS2Q68CL5 300 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 OR7E24Q6IFN5 339 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 C3orf33Q6P1S2 294 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ENPP7Q6UWV6 458 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 FAM83HQ6ZRV2 1179 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 NUDT18Q6ZVK8 323 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 GAREM2Q75VX8 874 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 NAA40Q86UY6 237 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF683Q8IZ20 524 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 WDSUB1Q8N9V3 476 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 OR2AK2Q8NG84 335 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 OR13C9Q8NGT0 318 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 SLAMF9Q96A28 289 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 VWCEQ96DN2 955 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 SORCS2Q96PQ0 1159 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 GDF15Q99988 308 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ACTRT3Q9BYD9 372 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 FKRPQ9H9S5 495 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 NRIP3Q9NQ35 241 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 LIPT1Q9Y234 373 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 SLC35A3Q9Y2D2 325 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 NEUROG3Q9Y4Z2 214 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 MCRIP1C9JLW8 97 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 GFYI3L273 518 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 NPC1O15118 1278 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF208O43345 1280 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 LGI1O95970 557 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 GIPP09681 153 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 EPXP11678 715 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 CPMP14384 443 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 IFNGR1P15260 489 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 NQO2P16083 231 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 TRHRP34981 398 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ACTA2P62736 377 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ACTG2P63267 376 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 C21orf62-AS1Q17RA5 79 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 VITQ6UXI7 678 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 MAMSTRQ6ZN01 415 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF620Q6ZNG0 422 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 DPY19L4Q7Z388 723 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 TSEN54Q7Z6J9 526 aaKnown RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 TPRA1Q86W33 373 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 LRRC25Q8N386 305 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-201ENST00000317716 DEFB119Q8N690 84 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 IL17RCQ8NAC3 791 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 TTLQ8NG68 377 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 OR7G2Q8NG99 324 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 OR14K1Q8NGZ2 314 aa6.94□□□□□ -1.3
CDHR3-201ENST00000317716 TCTEX1D2Q8WW35 142 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms