RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 MYADMQ96S97 322 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ENKD1Q9H0I2 346 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 MRPS30Q9NP92 439 aaKnown RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 EXOSC3Q9NQT5 275 aaKnown RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 A0A0B4J2A0 478 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TVP23AA6NH52 213 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 GLCEO94923 617 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ZFPL1O95159 310 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 PCDH8O95206 1070 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SLC35G6P0C7Q6 338 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 AK4P27144 223 aaPredicted RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 PDX1P52945 283 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SLC25A1P53007 311 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 NHLRC1Q6VVB1 395 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 THSD4Q6ZMP0 1018 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF813Q6ZN06 617 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 OLIG3Q7RTU3 272 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TAS1R1Q7RTX1 841 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 OR1J2Q8NGS2 313 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 OR2A1Q8NGT9 310 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 OR4K13Q8NH42 304 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SLC22A18Q96BI1 424 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SCGB3A2Q96PL1 93 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TNFRSF13CQ96RJ3 184 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 MED20Q9H944 212 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 BARX1Q9HBU1 254 aaPredicted RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 RXFP3Q9NSD7 469 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SHPKQ9UHJ6 478 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 PLEKHM1Q9Y4G2 1056 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 KPTNQ9Y664 436 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 KCNE3Q9Y6H6 103 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 A0A0B4J203 849 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 A0A1W2PPK0 400 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 OR5H14A6NHG9 310 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 PPP1R3DO95685 299 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 PDZK1IP1Q13113 114 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ELAVL3Q14576 367 aaKnown RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TAF13Q15543 124 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 METRNLQ641Q3 311 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 FCRL6Q6DN72 434 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SLC16A9Q7RTY1 509 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TAF8Q7Z7C8 310 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TMEM200AQ86VY9 491 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF561Q8N587 486 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TMEM229BQ8NBD8 167 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 MFSD9Q8NBP5 474 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 OR51S1Q8NGJ8 323 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 STK35Q8TDR2 534 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 CCDC74AQ96AQ1 378 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 NECAB3Q96P71 396 aaPredicted RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 PDCD1LG2Q9BQ51 273 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SLC17A9Q9BYT1 436 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SPHK2Q9NRA0 654 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 NOP16Q9Y3C1 178 aaKnown RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 A0A087WV62 115 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 GPR31O00270 319 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SLC17A2O00624 439 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 IGF2P01344 180 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 PET100P0DJ07 73 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 MAKP20794 623 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TACR3P29371 465 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 RAB11BQ15907 218 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 PLEKHN1Q494U1 663 aaPredicted RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 JMJD6Q6NYC1 403 aaPredicted RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF793Q6ZN11 406 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 DEFB132Q7Z7B7 95 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ADIPOR2Q86V24 386 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SLC30A7Q8NEW0 376 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 PTX4Q96A99 478 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 FOXRED1Q96CU9 486 aaPredicted RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TRMT61BQ9BVS5 477 aaKnown RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ADAP2Q9NPF8 381 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 CHRNA9Q9UGM1 479 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TEX13DA0A0J9YY54 714 aaPredicted RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 RNF222A6NCQ9 220 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 GLOD5A6NK44 160 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ITGB2P05107 769 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 MPZP25189 248 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 BDKRB2P30411 391 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 NAA10P41227 235 aaPredicted RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ALKBH1Q13686 389 aaKnown RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 GRM7Q14831 915 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 PRAMEF17Q5VTA0 474 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 C9orf131Q5VYM1 1079 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF547Q8IVP9 402 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF595Q8IYB9 648 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF440Q8IYI8 595 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 OR52E2Q8NGJ4 325 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 OR13C5Q8NGS8 318 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 OR9A2Q8NGT5 310 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 GPX7Q96SL4 187 aaPredicted RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF768Q9H5H4 540 aaKnown RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SFXN1Q9H9B4 322 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 PHPT1Q9NRX4 125 aaPredicted RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SLC22A11Q9NSA0 550 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 SHROOM3Q8TF72 1996 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 A0A0G2JN53 185 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ABHD14A-ACY1A0A1B0GW23 586 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 A0A1B0GWA3 101 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms