RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SLC38A2Q96QD8 506 aa6.94□□□□□ -1.3
TRIM55-202ENST00000315962 MS4A7Q9GZW8 240 aaPredicted RBP6.94□□□□□ -1.3
TRIM55-202ENST00000315962 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRIM55-202ENST00000315962 ARRDC1-AS1Q9H2J1 176 aa6.94□□□□□ -1.3
TRIM55-202ENST00000315962 GLTPQ9NZD2 209 aa6.94□□□□□ -1.3
TRIM55-202ENST00000315962 H2AFY2Q9P0M6 372 aaPredicted RBP6.94□□□□□ -1.3
TRIM55-202ENST00000315962 KIF26BQ2KJY2 2108 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 CUL9Q8IWT3 2517 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 FER1L5A0AVI2 2057 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 FAM186AA6NE01 2351 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 A0A0B4J2E0 115 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 A0A1B0GX12 115 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 FITM1A5D6W6 292 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 MCIDASD6RGH6 385 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 SCDO00767 359 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 RGS11O94810 467 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 PLGP00747 810 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-202ENST00000315962 ADRB1P08588 477 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 GSTM3P21266 225 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 RPS4Y1P22090 263 aaKnown RBP6.93□□□□□ -1.3
TRIM55-202ENST00000315962 FPR3P25089 353 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 MST1P26927 711 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 RORAP35398 523 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 EPHA4P54764 986 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 FBXW4P57775 412 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 OC90Q02509 493 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-202ENST00000315962 CRMP1Q14194 572 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 C3orf38Q5JPI3 329 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 RASSF6Q6ZTQ3 369 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 CDH24Q86UP0 819 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF680Q8NEM1 530 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 OR52E2Q8NGJ4 325 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 ZNRF4Q8WWF5 429 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 SLC39A7Q92504 469 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 HS6ST2Q96MM7 605 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 ERMAPQ96PL5 475 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-202ENST00000315962 NMNAT3Q96T66 252 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 NKX3-1Q99801 234 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-202ENST00000315962 LMF2Q9BU23 707 aaKnown RBP6.93□□□□□ -1.3
TRIM55-202ENST00000315962 PCED1AQ9H1Q7 454 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 UCK1Q9HA47 277 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 SLCO1C1Q9NYB5 712 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 KLHL21Q9UJP4 597 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 SIGLEC7Q9Y286 467 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 MPDZO75970 2070 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 A0A087WV48 116 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 ANKRD61A6NGH8 418 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 EFCAB7A8K855 629 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 J3QLW9 94 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 SSNA1O43805 119 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 LYPD3O95274 346 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 MPC2O95563 127 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 HEXBP07686 556 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 ANKRD34CP0C6C1 535 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 TRAPPC2P0DI81 140 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 TRAPPC2BP0DI82 140 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF19P17023 458 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 ABCD3P28288 659 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 IL12BP29460 328 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 BTCP35070 178 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 NAA10P41227 235 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-202ENST00000315962 CLDN12P56749 244 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 ERVK-25P63136 954 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 FOXK2Q01167 660 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 PLCXD2Q0VAA5 305 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 TNK1Q13470 666 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 TPBGQ13641 420 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 PGGHGQ32M88 737 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 WDR74Q6RFH5 385 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-202ENST00000315962 COX15Q7KZN9 410 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 KANSL1Q7Z3B3 1105 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 COMMD7Q86VX2 200 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 PLCZ1Q86YW0 608 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 ARIH2OSQ8N7S6 290 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 ZNF527Q8NB42 609 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 OSTF1Q92882 214 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 RFT1Q96AA3 541 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 MARVELD1Q9BSK0 173 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 G6PC3Q9BUM1 346 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 ZFP64Q9NPA5 681 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 ANKRD10Q9NXR5 420 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 SPATA2Q9UM82 520 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 TMEM5Q9Y2B1 443 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 IER3IP1Q9Y5U9 82 aa6.93□□□□□ -1.3
TRIM55-202ENST00000315962 CEP192Q8TEP8 1941 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 TEX13CA0A0J9YWL9 993 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 FAM86C2PA6NEL3 165 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 C11orf98E9PRG8 122 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 HCN1O60741 890 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 SLC22A5O76082 557 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 GPANK1O95872 356 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 F10P00742 488 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 HIST1H1CP16403 213 aaKnown RBP6.92□□□□□ -1.3
TRIM55-202ENST00000315962 AHCYP23526 432 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 RGS19P49795 217 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 PER3P56645 1201 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 FOXK1P85037 733 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 EFNB1P98172 346 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 RAB40BQ12829 278 aa6.92□□□□□ -1.3
TRIM55-202ENST00000315962 EXOSC2Q13868 293 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms