RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 H0Y8X5 98 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 DNASE2O00115 360 aaPredicted RBP7.05□□□□□ -1.28
CNOT4-201ENST00000315544 YKT6O15498 198 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 SH3BGRLO75368 114 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 DCNP07585 359 aaKnown RBP7.05□□□□□ -1.28
CNOT4-201ENST00000315544 ITGA5P08648 1049 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 CD63P08962 238 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 CD8BP10966 210 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 FZD2Q14332 565 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 DCAF12L2Q5VW00 463 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 KIAA0895LQ68EN5 471 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 PLPP7Q8NBV4 271 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 HPSE2Q8WWQ2 592 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 BPIFA2Q96DR5 249 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 KIF17Q9P2E2 1029 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 FLVCR1Q9Y5Y0 555 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 NUBP2Q9Y5Y2 271 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 FABP12A6NFH5 140 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 CPSF4LA6NMK7 179 aaKnown RBP7.05□□□□□ -1.28
CNOT4-201ENST00000315544 MCRIP1C9JLW8 97 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 SUSD5O60279 629 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 CALCBP10092 127 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 SLC2A2P11168 524 aaPredicted RBP7.05□□□□□ -1.28
CNOT4-201ENST00000315544 ALDH3B1P43353 468 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 MFGE8Q08431 387 aaPredicted RBP7.05□□□□□ -1.28
CNOT4-201ENST00000315544 NFATC4Q14934 902 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 RPL13AP3Q6NVV1 102 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 MOB3CQ70IA8 216 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 SYT9Q86SS6 491 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 KRT73Q86Y46 540 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 OR6V1Q8N148 313 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 POMGNT2Q8NAT1 580 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 OR10AC1Q8NH08 325 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 OR4C3Q8NH37 302 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 SAP25Q8TEE9 199 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 MIB2Q96AX9 1013 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 C4orf36Q96KX1 117 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 MMP25Q9NPA2 562 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 NCDNQ9UBB6 729 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 SEC14L3Q9UDX4 400 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 GTF3C1Q12789 2109 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 A0A1W2PPC4 97 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 HSPB2A8KAH6 182 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 H3BUI4 141 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 MAGEB4O15481 346 aaPredicted RBP7.05□□□□□ -1.28
CNOT4-201ENST00000315544 SSX5O60225 188 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 SS18L1O75177 396 aaPredicted RBP7.05□□□□□ -1.28
CNOT4-201ENST00000315544 HLA-DPB1P04440 258 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 DBIP07108 87 aaKnown RBP7.05□□□□□ -1.28
CNOT4-201ENST00000315544 MAGEB1P43366 347 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 FASLGP48023 281 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 CDH11P55287 796 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 INSM1Q01101 510 aaPredicted RBP7.05□□□□□ -1.28
CNOT4-201ENST00000315544 HSPB2Q16082 182 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 C6orf183Q5T699 404 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 PLBD1Q6P4A8 553 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 DPY19L2P2Q6ZN68 376 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 LHFPL1Q86WI0 220 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 P3H2Q8IVL5 708 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 SYTL1Q8IYJ3 562 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 STPG2Q8N412 459 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 RCBTB1Q8NDN9 531 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 EXOSC8Q96B26 276 aaKnown RBP7.05□□□□□ -1.28
CNOT4-201ENST00000315544 CLIP3Q96DZ5 547 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 ARSGQ96EG1 525 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 CCDC90BQ9GZT6 254 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 TCEAL2Q9H3H9 227 aaPredicted RBP7.05□□□□□ -1.28
CNOT4-201ENST00000315544 PROK2Q9HC23 129 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 BRD7Q9NPI1 651 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 RYDENQ9NUL5 291 aaKnown RBP7.05□□□□□ -1.28
CNOT4-201ENST00000315544 DDX28Q9NUL7 540 aaKnown RBP7.05□□□□□ -1.28
CNOT4-201ENST00000315544 HCN3Q9P1Z3 774 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 NLKQ9UBE8 527 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 CTSFQ9UBX1 484 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 SSR3Q9UNL2 185 aa7.05□□□□□ -1.28
CNOT4-201ENST00000315544 SLC22A23A1A5C7 686 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 FIGNL2A6NMB9 653 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 H0YC42 278 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 GABARAPH6UMI1 98 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 SULT1B1O43704 296 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 IDH3BO43837 385 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 TMCC2O75069 709 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 MAGP20916 626 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 SDHBP21912 280 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 CAPZA2P47755 286 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 EXOSC2Q13868 293 aaKnown RBP7.04□□□□□ -1.28
CNOT4-201ENST00000315544 GPR18Q14330 331 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 SLC9A5Q14940 896 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 UBXN2BQ14CS0 331 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 MPPED2Q15777 294 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 AANATQ16613 207 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 FAM205BPQ63HN1 556 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 ANKRD16Q6P6B7 361 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 ESPNLQ6ZVH7 1005 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 OR8D1Q8WZ84 308 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 SNAPC3Q92966 411 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 TMEM203Q969S6 136 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 C20orf85Q9H1P6 137 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 ARV1Q9H2C2 271 aa7.04□□□□□ -1.28
CNOT4-201ENST00000315544 SLC17A5Q9NRA2 495 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms