RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 ATP5J2P56134 94 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 TUBA1BP68363 451 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 TUBA4AP68366 448 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 ROR2Q01974 943 aaKnown RBP14.27□□□□□ -0.13
LSM1-201ENST00000311351 POU3F1Q03052 451 aaPredicted RBP14.27□□□□□ -0.13
LSM1-201ENST00000311351 TBRG1Q3YBR2 411 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 SLC22A25Q6T423 547 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 KLHL24Q6TFL4 600 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 TUBA1AQ71U36 451 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 PCYOX1LQ8NBM8 494 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 ADPRHL1Q8NDY3 354 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 C18orf12Q96KH6 178 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 ZNF583Q96ND8 569 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 ASPNQ9BXN1 380 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 NELFAQ9H3P2 528 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 GMPR2Q9P2T1 348 aaKnown RBP14.27□□□□□ -0.13
LSM1-201ENST00000311351 SLC7A7Q9UM01 511 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 CORINQ9Y5Q5 1042 aa14.27□□□□□ -0.13
LSM1-201ENST00000311351 FAM220BPB1ANY3 271 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 MS4A18H0YCH9 400 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 H7C1Q1 480 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 OVOL3O00110 214 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 KPNA4O00629 521 aaPredicted RBP14.26□□□□□ -0.13
LSM1-201ENST00000311351 SHOX2O60902 331 aaPredicted RBP14.26□□□□□ -0.13
LSM1-201ENST00000311351 SLC43A1O75387 559 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 NPPAP01160 153 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 FOSL1P15407 271 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 PAX1P15863 534 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 PRPS1P60891 318 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 MFSD13AQ14CX5 517 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 MS4A18Q3C1V0 323 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 LRRC23Q53EV4 343 aaPredicted RBP14.26□□□□□ -0.13
LSM1-201ENST00000311351 HMBOX1Q6NT76 420 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 PRSS57Q6UWY2 283 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 LINC00114Q6XXX2 140 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 CARM1Q86X55 608 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 WDFY1Q8IWB7 410 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 UEVLDQ8IX04 471 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 TMEM123Q8N131 208 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 OR6S1Q8NH40 331 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 GTPBP3Q969Y2 492 aaKnown RBP14.26□□□□□ -0.13
LSM1-201ENST00000311351 OR2M2Q96R28 347 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 TRAF4Q9BUZ4 470 aaPredicted RBP14.26□□□□□ -0.13
LSM1-201ENST00000311351 LINC00470Q9BZP3 86 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 GID8Q9NWU2 228 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 POU2F3Q9UKI9 436 aa14.26□□□□□ -0.13
LSM1-201ENST00000311351 A0A096LPE4 126 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 A0A1W2PPZ6 126 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 TRAPPC13A5PLN9 417 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 OR6C65A6NJZ3 312 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 E7EQL1 145 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 DYNC1I1O14576 645 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 SLC22A2O15244 555 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 AKAP8O43823 692 aaKnown RBP14.25□□□□□ -0.13
LSM1-201ENST00000311351 TMCC2O75069 709 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 SERPINI2O75830 405 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 SEC14L2O76054 403 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 CD8AP01732 235 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 INHBBP09529 407 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 PMS2P3Q13401 168 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 VEZF1Q14119 521 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 PHYHD1Q5SRE7 291 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 CARD17Q5XLA6 110 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 ERICH5Q6P6B1 374 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 SCAIQ8N9R8 606 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 RASSF5Q8WWW0 418 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 PROX1Q92786 737 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 BCL2L2Q92843 193 aaPredicted RBP14.25□□□□□ -0.13
LSM1-201ENST00000311351 ZNF837Q96EG3 531 aaPredicted RBP14.25□□□□□ -0.13
LSM1-201ENST00000311351 COX4I2Q96KJ9 171 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 EMC6Q9BV81 110 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 PCDHAC1Q9H158 963 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 MED29Q9NX70 200 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 MRPL39Q9NYK5 338 aaKnown RBP14.25□□□□□ -0.13
LSM1-201ENST00000311351 MGAT4BQ9UQ53 548 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 SH3GLB1Q9Y371 365 aa14.25□□□□□ -0.13
LSM1-201ENST00000311351 NAV3Q8IVL0 2385 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 LOC102725191A0A1B0GVB3 256 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 ATP6V1G2-DDX39BF2Z307 99 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 SMAD7O15105 426 aaKnown RBP14.24□□□□□ -0.13
LSM1-201ENST00000311351 NDUFS7O75251 213 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 WNT11O96014 354 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 COX4I1P13073 169 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 ARF1P84077 181 aaKnown RBP14.24□□□□□ -0.13
LSM1-201ENST00000311351 PUDPQ08623 228 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 CEACAM16Q2WEN9 425 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 TTC33Q6PID6 262 aaPredicted RBP14.24□□□□□ -0.13
LSM1-201ENST00000311351 DEF8Q6ZN54 512 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 Q71RC1 249 aaPredicted RBP14.24□□□□□ -0.13
LSM1-201ENST00000311351 DTX2Q86UW9 622 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 TREML1Q86YW5 311 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 GPR137CQ8N3F9 429 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 PIK3C3Q8NEB9 887 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 OR2T12Q8NG77 320 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 BOD1Q96IK1 185 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 TXNDC15Q96J42 360 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 RADILQ96JH8 1075 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 PRSS27Q9BQR3 290 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 ALG2Q9H553 416 aa14.24□□□□□ -0.13
LSM1-201ENST00000311351 CRLF2Q9HC73 371 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms