RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 TRAV1-2A0A0B4J238 106 aa13.19□□□□□ -0.3
SCUBE2-201ENST00000309263 ADH1CP00326 375 aa13.19□□□□□ -0.3
SCUBE2-201ENST00000309263 FAUP35544 74 aaKnown RBP13.19□□□□□ -0.3
SCUBE2-201ENST00000309263 LTBQ06643 244 aa13.19□□□□□ -0.3
SCUBE2-201ENST00000309263 GAS6Q14393 721 aa13.19□□□□□ -0.3
SCUBE2-201ENST00000309263 TSSK4Q6SA08 328 aa13.19□□□□□ -0.3
SCUBE2-201ENST00000309263 SLC38A3Q99624 504 aa13.19□□□□□ -0.3
SCUBE2-201ENST00000309263 DPYSL5Q9BPU6 564 aa13.19□□□□□ -0.3
SCUBE2-201ENST00000309263 ADAT1Q9BUB4 502 aaKnown RBP13.19□□□□□ -0.3
SCUBE2-201ENST00000309263 MENTQ9BUN1 341 aa13.19□□□□□ -0.3
SCUBE2-201ENST00000309263 SLC6A17Q9H1V8 727 aa13.19□□□□□ -0.3
SCUBE2-201ENST00000309263 ZNF768Q9H5H4 540 aaKnown RBP13.19□□□□□ -0.3
SCUBE2-201ENST00000309263 IL23AQ9NPF7 189 aa13.19□□□□□ -0.3
SCUBE2-201ENST00000309263 TDRD6O60522 2096 aaKnown RBP13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 KCNAB3O43448 404 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 F13BP05160 661 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 NGFRP08138 427 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 OR2T7P0C7T2 308 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 GABRA1P14867 456 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 RAG2P55895 527 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 EEF1A1P68104 462 aaKnown RBP13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 ZNF169Q14929 603 aaPredicted RBP13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 ZNF77Q15935 545 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 ETFDHQ16134 617 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 NKPD1Q17RQ9 610 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 ZNF542PQ5EBM4 170 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 ZNF546Q86UE3 836 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 PAQR7Q86WK9 346 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 GLB1L2Q8IW92 636 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 BVESQ8NE79 360 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 OR2T27Q8NH04 317 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 OR14C36Q8NHC7 312 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 STK35Q8TDR2 534 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 SHARPINQ9H0F6 387 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 HPF1Q9NWY4 346 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 OPN4Q9UHM6 478 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 MOKQ9UQ07 419 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 ZNF281Q9Y2X9 895 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 ELOA3DA6NLF2 546 aaPredicted RBP13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 M0QYG6 137 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 B3GALT2O43825 422 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 SC5DO75845 299 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 EFEMP2O95967 443 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 LUMP51884 338 aaPredicted RBP13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 RPS11P62280 158 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 ELOA3BQ3SY89 546 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 PWWP2BQ6NUJ5 590 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 ELOA3Q8NG57 546 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 OR6N2Q8NGY6 317 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 OR10AC1Q8NH08 325 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 NPDC1Q9NQX5 325 aaPredicted RBP13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 PHPT1Q9NRX4 125 aaPredicted RBP13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 ZNF223Q9UK11 482 aaPredicted RBP13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 FBXO4Q9UKT5 387 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 PLCL2Q9UPR0 1127 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 FOXJ3Q9UPW0 622 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 TPRP12270 2363 aaKnown RBP13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 D6RAR5 112 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 GPANK1O95872 356 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 EMDP50402 254 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 DPTQ07507 201 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 DUSP8Q13202 625 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 ZNF626Q68DY1 528 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 VITQ6UXI7 678 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 BAIAP2L2Q6UXY1 529 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 PARGQ86W56 976 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 BEST3Q8N1M1 668 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 HAVCR2Q8TDQ0 301 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 TMEM106AQ96A25 262 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 SRMSQ9H3Y6 488 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 SERGEFQ9UGK8 458 aa13.18□□□□□ -0.3
SCUBE2-201ENST00000309263 OR6C68A6NDL8 312 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 ADAM11O75078 769 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 NDUFB2O95178 105 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 CD3DP04234 171 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 HIST1H2ABP04908 130 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 MNDAP41218 407 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 IRF4Q15306 451 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 ARHGAP11BQ3KRB8 267 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 B3GNTL1Q67FW5 361 aaPredicted RBP13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 HIST3H2AQ7L7L0 130 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 OVCH1Q7RTY7 1134 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 OR2AK2Q8NG84 335 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 OR5AK2Q8NH90 309 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 HIST1H2ACQ93077 130 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 FLRT3Q9NZU0 649 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 DISC1C4P0D8 188 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 MYOGP15173 224 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 RUNX2Q13950 521 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 PRAMEF8Q5VWM4 474 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 PRAMEF7Q5VXH5 474 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 RPL13AP3Q6NVV1 102 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 STAC2Q6ZMT1 411 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 OR51A4Q8NGJ6 313 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 TSNAXQ99598 290 aaKnown RBP13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 NOP16Q9Y3C1 178 aaKnown RBP13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 MTCL1Q9Y4B5 1905 aaKnown RBP13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 NAP1L6A6NFF2 107 aa13.17□□□□□ -0.3
SCUBE2-201ENST00000309263 FGF17O60258 216 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms