RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 RAB1CQ92928 201 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 ZG16BQ96DA0 208 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 ZNF75AQ96N20 296 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 OR51I1Q9H343 314 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 TUBB1Q9H4B7 451 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 POLE3Q9NRF9 147 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 ZDHHC18Q9NUE0 388 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 TAAR3PQ9P1P4 343 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 LEF1Q9UJU2 399 aaPredicted RBP10.05□□□□□ -0.8
SMIM4-201ENST00000307106 PURGQ9UJV8 347 aaKnown RBP10.05□□□□□ -0.8
SMIM4-201ENST00000307106 RASD1Q9Y272 281 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 AUP1Q9Y679 476 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 CACNG2Q9Y698 323 aa10.05□□□□□ -0.8
SMIM4-201ENST00000307106 RNF103-CHMP3A0A140T963 221 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 ISPDA4D126 451 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 ZNF99A8MXY4 864 aaPredicted RBP10.04□□□□□ -0.8
SMIM4-201ENST00000307106 TMEM114B3SHH9 223 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 PIN1P1O15428 100 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 TPD52L2O43399 206 aaKnown RBP10.04□□□□□ -0.8
SMIM4-201ENST00000307106 FRS3O43559 492 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 TRAF3IP2O43734 574 aaPredicted RBP10.04□□□□□ -0.8
SMIM4-201ENST00000307106 SLC43A1O75387 559 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 GPANK1O95872 356 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 GUSBP08236 651 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 LINC00032P0C843 101 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 OR12D1P0DN82 309 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 MYL2P10916 166 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 CXCR1P25024 350 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 MTNR1AP48039 350 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 RAG2P55895 527 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 BNIP2Q12982 314 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 ZNF154Q13106 437 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 PTGR1Q14914 329 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 HFEQ30201 348 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 CFAP157Q5JU67 520 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 ATAD3BQ5T9A4 648 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 OLFML2AQ68BL7 652 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 ASPHD2Q6ICH7 369 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 FRRS1Q6ZNA5 592 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 TIFABQ6ZNK6 161 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 CMIPQ8IY22 773 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 KDM8Q8N371 416 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 SNX33Q8WV41 574 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 XAGE5Q8WWM1 108 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 ROPN1LQ96C74 230 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 TSPAN32Q96QS1 320 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 HINT3Q9NQE9 182 aaKnown RBP10.04□□□□□ -0.8
SMIM4-201ENST00000307106 MMP26Q9NRE1 261 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 UBAP1Q9NZ09 502 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 SLC7A8Q9UHI5 535 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 GPR160Q9UJ42 338 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 RCE1Q9Y256 329 aa10.04□□□□□ -0.8
SMIM4-201ENST00000307106 G3V2L1 256 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 FAAHO00519 579 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 AZIN1O14977 448 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 TSPAN15O95858 294 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 AGR2O95994 175 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 CLPTM1O96005 669 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 UQCRBP14927 111 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 ZNF43P17038 809 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 PTDSS1P48651 473 aaKnown RBP10.03□□□□□ -0.8
SMIM4-201ENST00000307106 SELENOVP59797 346 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 FUT5Q11128 374 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 RGS7BPQ6MZT1 257 aaPredicted RBP10.03□□□□□ -0.8
SMIM4-201ENST00000307106 ZYG11AQ6WRX3 759 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 Q6ZPA2 131 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 RNF165Q6ZSG1 346 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 JAZF1Q86VZ6 243 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 COQ8BQ96D53 544 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 TRIM44Q96DX7 344 aaPredicted RBP10.03□□□□□ -0.8
SMIM4-201ENST00000307106 PRPF18Q99633 342 aaKnown RBP10.03□□□□□ -0.8
SMIM4-201ENST00000307106 MRI1Q9BV20 369 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 DECR2Q9NUI1 292 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 NKIRAS2Q9NYR9 191 aa10.03□□□□□ -0.8
SMIM4-201ENST00000307106 CLPSL1A2RUU4 121 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 FAM181BA6NEQ2 426 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 CFAP73A6NFT4 308 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 SLC22A31A6NKX4 558 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 A8MVM7 634 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 RAB36O95755 333 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 NGFP01138 241 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 CRYBA1P05813 215 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 ZNF12P17014 697 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 MAPK1P28482 360 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 LSP1P33241 339 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 KLF3P57682 345 aaPredicted RBP10.02□□□□□ -0.81
SMIM4-201ENST00000307106 KRTAP10-3P60369 221 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 HPCAP84074 193 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 SLC7A5Q01650 507 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 EPS8Q12929 822 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 TAF9Q16594 264 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 TSTQ16762 297 aaKnown RBP10.02□□□□□ -0.81
SMIM4-201ENST00000307106 GSTA3Q16772 222 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 GPAT3Q53EU6 434 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 C1orf140Q5VVS0 124 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 TNFAIP8L2Q6P589 184 aaPredicted RBP10.02□□□□□ -0.81
SMIM4-201ENST00000307106 SYT10Q6XYQ8 523 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 KRTCAP2Q8N6L1 136 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 PIK3C3Q8NEB9 887 aa10.02□□□□□ -0.81
SMIM4-201ENST00000307106 MIPOL1Q8TD10 442 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms