RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 LTB4RQ15722 352 aa7.73□□□□□ -1.17
PCDHB1-201ENST00000306549 DUSP7Q16829 419 aa7.73□□□□□ -1.17
PCDHB1-201ENST00000306549 LETMD1Q6P1Q0 360 aa7.73□□□□□ -1.17
PCDHB1-201ENST00000306549 RBMXL1Q96E39 390 aaKnown RBP7.73□□□□□ -1.17
PCDHB1-201ENST00000306549 FAM46AQ96IP4 442 aaKnown RBP7.73□□□□□ -1.17
PCDHB1-201ENST00000306549 PRRC1Q96M27 445 aa7.73□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF705FA8MVS1 300 aaPredicted RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF705DP0CH99 300 aaPredicted RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF705BP0CI00 300 aaPredicted RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF728P0DKX0 622 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 MAOBP27338 520 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 CHATP28329 748 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 MOB3CQ70IA8 216 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 TMEM102Q8N9M5 508 aaPredicted RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ZDHHC16Q969W1 377 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ATOH8Q96SQ7 321 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ANKRD19PQ9H560 264 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 IL21Q9HBE4 155 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 EBF1Q9UH73 591 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 NOSIPQ9Y314 301 aaKnown RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 COL4A5P29400 1685 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 MCRIP1C9JLW8 97 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF587BE7ETH6 402 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 SYT5O00445 386 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 LCMT2O60294 686 aaKnown RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 PAX6P26367 422 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 PRSS36Q5K4E3 855 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 LCN8Q6JVE9 175 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 IL20RBQ6UXL0 311 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ACOT11Q8WXI4 607 aaPredicted RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 PIGCQ92535 297 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 MAELQ96JY0 434 aaKnown RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 LRFN5Q96NI6 719 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 KCNA7Q96RP8 456 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 PHOX2BQ99453 314 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 OCSTAMPQ9BR26 566 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 TEX10Q9NXF1 929 aaPredicted RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 TRAPPC2LQ9UL33 140 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 HELZP42694 1942 aaKnown RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 NAP1L6A6NFF2 107 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 CD8B2A6NJW9 211 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF736B4DX44 427 aaPredicted RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 SULT1C2O00338 296 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 B4GAT1O43505 415 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ADAM23O75077 832 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 SCO1O75880 301 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 KCNK2O95069 426 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ZIC2O95409 532 aaPredicted RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 CD8BP10966 210 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 IVDP26440 423 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 SSX2Q16385 188 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 RPS19BP1Q86WX3 136 aaKnown RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF761Q86XN6 746 aaPredicted RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 CHTF18Q8WVB6 975 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 DUSP22Q9NRW4 184 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 MUTYHQ9UIF7 546 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 C21orf140B9A014 251 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 YY2O15391 372 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 GPR39O43194 453 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 GABRG2P18507 467 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 PRKAR1BP31321 381 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 BCL6P41182 706 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 CSN1S1P47710 185 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 AKR1C1Q04828 323 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 SPHARQ15513 63 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF789Q5FWF6 425 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 SLC15A4Q8N697 577 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 LMF1Q96S06 567 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 TMEM246Q9BRR3 403 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF225Q9UK10 706 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 MYOCOSA0A1B0GUC4 107 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 A0A1W2PS29 197 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 TCRBV5S1A1TA0A578 114 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 SLC5A10A0PJK1 596 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 C1orf196B1AJZ1 125 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 SELENOWP63302 87 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 HBG1P69891 147 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 HBG2P69892 147 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 MRPS10P82664 201 aaKnown RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 KIAA1211LQ6NV74 962 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 DPY19L2P1Q6NXN4 242 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 PAPD4Q6PIY7 484 aaKnown RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 OR6F1Q8NGZ6 308 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF420Q8TAQ5 688 aaPredicted RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 BAHD1Q8TBE0 780 aaPredicted RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF583Q96ND8 569 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 TRIB1Q96RU8 372 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 EBF4Q9BQW3 602 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 MS4A8Q9BY19 250 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 SHARPINQ9H0F6 387 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 YBX2Q9Y2T7 364 aaKnown RBP7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 LOXL2Q9Y4K0 774 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 LRP5LA4QPB2 252 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 RAD52P43351 418 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 ZXDAP98168 799 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 PLA2G7Q13093 441 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 DEFB110Q30KQ9 67 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 HLA-BQ31612 363 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 SFT2D3Q587I9 215 aa7.72□□□□□ -1.17
PCDHB1-201ENST00000306549 DCUN1D4Q92564 292 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms