RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 SIT1Q9Y3P8 196 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 SCDO00767 359 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 STOMP27105 288 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 ZNF81P51508 661 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 ZNF85Q03923 595 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 SHBQ15464 509 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 TOMM34Q15785 309 aaPredicted RBP19.99■□□□□ 0.79
TPM4-201ENST00000300933 TP53I3Q53FA7 332 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 OR5J2Q8NH18 312 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 DNASE2BQ8WZ79 361 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 CCDC74AQ96AQ1 378 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 HEXA-AS1Q9H8Q6 139 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 ASB6Q9NWX5 421 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 SLC22A31A6NKX4 558 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 ELOA3DA6NLF2 546 aaPredicted RBP19.99■□□□□ 0.79
TPM4-201ENST00000300933 EEF1E1O43324 174 aaKnown RBP19.99■□□□□ 0.79
TPM4-201ENST00000300933 RNF13O43567 381 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 FBLP22087 321 aaKnown RBP19.99■□□□□ 0.79
TPM4-201ENST00000300933 SLC2A5P22732 501 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 AQP2P41181 271 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.99■□□□□ 0.79
TPM4-201ENST00000300933 ELOA3BQ3SY89 546 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 RPL13AP3Q6NVV1 102 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 CD200R1LQ6Q8B3 271 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 MARCH3Q86UD3 253 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 NR2C2APQ86WQ0 139 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 C9orf40Q8IXQ3 194 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 ELOA3Q8NG57 546 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 OR5W2Q8NH69 310 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 CEP76Q8TAP6 659 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 THAP3Q8WTV1 239 aaPredicted RBP19.99■□□□□ 0.79
TPM4-201ENST00000300933 SLCO1C1Q9NYB5 712 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 CHRNA9Q9UGM1 479 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 TP53BP1Q12888 1972 aaPredicted RBP19.98■□□□□ 0.79
TPM4-201ENST00000300933 NDUFB2O95178 105 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 F13BP05160 661 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 PYCR1P32322 319 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 RORAP35398 523 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 RBM34P42696 430 aaKnown RBP19.98■□□□□ 0.79
TPM4-201ENST00000300933 EXOSC2Q13868 293 aaKnown RBP19.98■□□□□ 0.79
TPM4-201ENST00000300933 GALEQ14376 348 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 MFSD13AQ14CX5 517 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 PLA1AQ53H76 456 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 SLC38A9Q8NBW4 561 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 BEST4Q8NFU0 473 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 MARVELD3Q96A59 401 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 ISYNA1Q9NPH2 558 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 ENAMQ9NRM1 1142 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 EFCAB7A8K855 629 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 DHFRP00374 187 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 PDGFBP01127 241 aaPredicted RBP19.98■□□□□ 0.79
TPM4-201ENST00000300933 TFP02787 698 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 HLA-DPB1P04440 258 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 TPOP07202 933 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 PPICP45877 212 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 EPHA4P54764 986 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 SNTA1Q13424 505 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 OR2I1PQ8NGU4 316 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 OR6K6Q8NGW6 343 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 VN1R1Q9GZP7 353 aa19.98■□□□□ 0.79
TPM4-201ENST00000300933 RANBP3Q9H6Z4 567 aaPredicted RBP19.98■□□□□ 0.79
TPM4-201ENST00000300933 BLACEA4D250 179 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 FOSL2P15408 326 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 ITPKBP27987 946 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 GPR143P51810 404 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 OTPQ5XKR4 325 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 D2HGDHQ8N465 521 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 ZNF563Q8TA94 476 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 ADIPOR1Q96A54 375 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 RFT1Q96AA3 541 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 LCORQ96JN0 433 aaPredicted RBP19.97■□□□□ 0.79
TPM4-201ENST00000300933 RAB33BQ9H082 229 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 ADAM30Q9UKF2 790 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 IGKV3D-11A0A0A0MRZ8 115 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 OR6C68A6NDL8 312 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 HCRTR2O43614 444 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 TOXO94900 526 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 NUDT14O95848 222 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 IGKV3-11P04433 115 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 SHC1P29353 583 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 SKP2Q13309 424 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 AANATQ16613 207 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 NTRK2Q16620 822 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 C1QL3Q5VWW1 255 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 OR5M10Q6IEU7 315 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 ZNF574Q6ZN55 896 aaPredicted RBP19.97■□□□□ 0.79
TPM4-201ENST00000300933 MS4A3Q96HJ5 214 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 Q96M85 177 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 ZNF578Q96N58 590 aaPredicted RBP19.97■□□□□ 0.79
TPM4-201ENST00000300933 ELF4Q99607 663 aaPredicted RBP19.97■□□□□ 0.79
TPM4-201ENST00000300933 B3GNT4Q9C0J1 378 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 SERTAD3Q9UJW9 196 aa19.97■□□□□ 0.79
TPM4-201ENST00000300933 C2orf72A6NCS6 295 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 TIAF1O95411 115 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 ANXA3P12429 323 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 PSMD4P55036 377 aaKnown RBP19.96■□□□□ 0.79
TPM4-201ENST00000300933 PMEPA1Q969W9 287 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 KTI12Q96EK9 354 aaPredicted RBP19.96■□□□□ 0.79
TPM4-201ENST00000300933 SLC46A1Q96NT5 459 aa19.96■□□□□ 0.79
TPM4-201ENST00000300933 SLC7A5P2Q9GIP4 190 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms