RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 FGF9P31371 208 aaPredicted RBP19.31■□□□□ 0.68
SOX17-201ENST00000297316 OR12D2P58182 307 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 RPL18Q07020 188 aaKnown RBP19.31■□□□□ 0.68
SOX17-201ENST00000297316 C17orf67Q0P5P2 114 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 EXT1Q16394 746 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 NTRK2Q16620 822 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 ALG10Q5BKT4 473 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 IL20RBQ6UXL0 311 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 TMEM91Q6ZNR0 172 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 NCCRP1Q6ZVX7 275 aaPredicted RBP19.31■□□□□ 0.68
SOX17-201ENST00000297316 NDUFAF7Q7L592 441 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 PIP4P1Q86T03 277 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 CCDC190Q86UF4 302 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 FAM83FQ8NEG4 500 aaPredicted RBP19.31■□□□□ 0.68
SOX17-201ENST00000297316 RNF138Q8WVD3 245 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 TTC9Q92623 222 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 C4orf36Q96KX1 117 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 NMNAT2Q9BZQ4 307 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 METTL7AQ9H8H3 244 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 INPP5EQ9NRR6 644 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 PLEKHB1Q9UF11 243 aaPredicted RBP19.31■□□□□ 0.68
SOX17-201ENST00000297316 TMED7Q9Y3B3 224 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 DOCK10Q96BY6 2186 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 SUSD5O60279 629 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 SPI1P17947 270 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 TMED10P49755 219 aaKnown RBP19.31■□□□□ 0.68
SOX17-201ENST00000297316 CTXN1P60606 82 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 PRAMEF20Q5VT98 475 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 RPTNQ6XPR3 784 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 CDCP1Q9H5V8 836 aa19.31■□□□□ 0.68
SOX17-201ENST00000297316 FARSAQ9Y285 508 aaKnown RBP19.31■□□□□ 0.68
SOX17-201ENST00000297316 FAM171A2A8MVW0 826 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 J3QLW9 94 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 RNF13O43567 381 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 BGLAPP02818 100 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 CD14P08571 375 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 ZNF19P17023 458 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 GTF2E2P29084 291 aaKnown RBP19.3■□□□□ 0.68
SOX17-201ENST00000297316 Q0VFX4 171 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 LEG1Q6P5S2 330 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 LSM14AQ8ND56 463 aaKnown RBP19.3■□□□□ 0.68
SOX17-201ENST00000297316 M1APQ8TC57 530 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 TSSK2Q96PF2 358 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 PTDSS2Q9BVG9 487 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 SIAEQ9HAT2 523 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 PCDHGA1Q9Y5H4 931 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 CNOT1A5YKK6 2376 aaKnown RBP19.3■□□□□ 0.68
SOX17-201ENST00000297316 TBX1O43435 398 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 TNFSF8P32971 234 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 POLR2HP52434 150 aaKnown RBP19.3■□□□□ 0.68
SOX17-201ENST00000297316 NUBP1P53384 320 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 BDH1Q02338 343 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 GGTLC2Q14390 218 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 STPG1Q5TH74 334 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 MISPQ8IVT2 679 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 LAX1Q8IWV1 398 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 OR5J2Q8NH18 312 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 ABCB10Q9NRK6 738 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 GRIP1Q9Y3R0 1128 aa19.3■□□□□ 0.68
SOX17-201ENST00000297316 MRPS18BQ9Y676 258 aaKnown RBP19.3■□□□□ 0.68
SOX17-201ENST00000297316 CNTRLQ7Z7A1 2325 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 HTR3EA5X5Y0 456 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 ANKUB1A6NFN9 424 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 SELENOFO60613 162 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 PRKCAP17252 672 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 ETV6P41212 452 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 CASP3P42574 277 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 TUBA3EQ6PEY2 450 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 GRINAQ7Z429 371 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 NANOGNBQ7Z5D8 188 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 ASB15Q8WXK1 588 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 HPS1Q92902 700 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 SLC25A36Q96CQ1 311 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 SACM1LQ9NTJ5 587 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 PPP4R1LQ9P1A2 415 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 COPS3Q9UNS2 423 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 CHCHD2Q9Y6H1 151 aaPredicted RBP19.29■□□□□ 0.68
SOX17-201ENST00000297316 ZNF292O60281 2723 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 RIF1Q5UIP0 2472 aaKnown RBP19.29■□□□□ 0.68
SOX17-201ENST00000297316 SPAARA0A1B0GVQ0 90 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 H7C1C5 153 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 UPK1BO75841 260 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 MT-ND5P03915 603 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 PYCR1P32322 319 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 DIO1P49895 249 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 LCN6P62502 163 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 TSPAN32Q96QS1 320 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 CNN2Q99439 309 aaKnown RBP19.29■□□□□ 0.68
SOX17-201ENST00000297316 SDHCQ99643 169 aaPredicted RBP19.29■□□□□ 0.68
SOX17-201ENST00000297316 MED18Q9BUE0 208 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 RPRD1BQ9NQG5 326 aaKnown RBP19.29■□□□□ 0.68
SOX17-201ENST00000297316 WDR70Q9NW82 654 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 CRNNQ9UBG3 495 aaPredicted RBP19.29■□□□□ 0.68
SOX17-201ENST00000297316 ZNF229Q9UJW7 825 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 WIF1Q9Y5W5 379 aa19.29■□□□□ 0.68
SOX17-201ENST00000297316 RGS5O15539 181 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 IDH3BO43837 385 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 SLC25A12O75746 678 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 TNFSF15O95150 251 aa19.28■□□□□ 0.68
SOX17-201ENST00000297316 HLA-DPB1P04440 258 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms