RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 MFSD4AQ8N468 514 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 TMEM156Q8N614 296 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 OR52E2Q8NGJ4 325 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 OTULINQ96BN8 352 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 MAP6Q96JE9 813 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 MRGPRX4Q96LA9 322 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 DDOQ99489 341 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 MGLLQ99685 303 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 AIFM2Q9BRQ8 373 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 WDR70Q9NW82 654 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 VDAC3Q9Y277 283 aa14.06□□□□□ -0.16
LSM6-201ENST00000296581 TMEM129A0AVI4 362 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 SLC22A31A6NKX4 558 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 J3QRE1 110 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 IMPA2O14732 288 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 ZNF208O43345 1280 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 APOL3O95236 402 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 TXNDC12O95881 172 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 HIST1H2ABP04908 130 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 MYL12AP19105 171 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 CD82P27701 267 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 ERVK-25P63136 954 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 GABREP78334 506 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.05□□□□□ -0.16
LSM6-201ENST00000296581 AQP6Q13520 282 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 SPHARQ15513 63 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 INPP5JQ15735 1006 aaPredicted RBP14.05□□□□□ -0.16
LSM6-201ENST00000296581 PAQR6Q6TCH4 344 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 HIST3H2AQ7L7L0 130 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 CYB561A3Q8NBI2 242 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 OR4K13Q8NH42 304 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 HIST1H2ACQ93077 130 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 NKD1Q969G9 470 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 SP140LQ9H930 580 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 HPF1Q9NWY4 346 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 UGT2A1Q9Y4X1 527 aa14.05□□□□□ -0.16
LSM6-201ENST00000296581 MYL12BO14950 172 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 OR2T1O43869 369 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 AHSA1O95433 338 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 LIMS3P0CW19 117 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 LIMS4P0CW20 117 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 CCL3P10147 92 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 RGS6P49758 472 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 SGCBQ16585 318 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 PRAMEF20Q5VT98 475 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 RSBN1Q5VWQ0 802 aaPredicted RBP14.04□□□□□ -0.16
LSM6-201ENST00000296581 SHFQ7M4L6 423 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 FAM98AQ8NCA5 519 aaKnown RBP14.04□□□□□ -0.16
LSM6-201ENST00000296581 SDR9C7Q8NEX9 313 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 OR4F15Q8NGB8 312 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 POC1BQ8TC44 478 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 C1GALT1C1Q96EU7 318 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 SGCZQ96LD1 299 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 OPALINQ96PE5 141 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 SNX18Q96RF0 628 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 TEAD3Q99594 435 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 OR11A1Q9GZK7 315 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 PROK2Q9HC23 129 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 KLHL1Q9NR64 748 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 HAO2Q9NYQ3 351 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 FBXL2Q9UKC9 423 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 MRPS18BQ9Y676 258 aaKnown RBP14.04□□□□□ -0.16
LSM6-201ENST00000296581 FTCDNL1E5RQL4 147 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 CTXN1P60606 82 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 SLC22A10Q63ZE4 541 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 C19orf48Q6RUI8 117 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 IDO2Q6ZQW0 420 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 SIRT6Q8N6T7 355 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 NPEPL1Q8NDH3 523 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 PSD4Q8NDX1 1056 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 PSMF1Q92530 271 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 ZNF649Q9BS31 505 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 TAS2R5Q9NYW4 299 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 TNFRSF10DQ9UBN6 386 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 DOCK10Q96BY6 2186 aa14.04□□□□□ -0.16
LSM6-201ENST00000296581 CDRT15L2A8MXV6 281 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 SCG5P05408 212 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 KRT8P05787 483 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 C1DQ13901 141 aaKnown RBP14.03□□□□□ -0.16
LSM6-201ENST00000296581 KLHL12Q53G59 568 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 EMC4Q5J8M3 183 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 ZNF468Q5VIY5 522 aaPredicted RBP14.03□□□□□ -0.16
LSM6-201ENST00000296581 JMJD6Q6NYC1 403 aaPredicted RBP14.03□□□□□ -0.16
LSM6-201ENST00000296581 LINC00299Q6ZSB3 139 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 MARCH9Q86YJ5 346 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 PLCZ1Q86YW0 608 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 OR4K17Q8NGC6 315 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 OR5J2Q8NH18 312 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 CHAC2Q8WUX2 184 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 HTRA1Q92743 480 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 Q96M85 177 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 NMNAT2Q9BZQ4 307 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 OR51V1Q9H2C8 321 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 PTGES2Q9H7Z7 377 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 IL17BQ9UHF5 180 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 MUC6Q6W4X9 2439 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 TM4SF5O14894 197 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 EFNA2O43921 213 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 DXOO77932 396 aaKnown RBP14.03□□□□□ -0.16
LSM6-201ENST00000296581 F13BP05160 661 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms