RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 CADM4Q8NFZ8 388 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 OR2I1PQ8NGU4 316 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 KIAA1143Q96AT1 154 aaPredicted RBP10.69□□□□□ -0.7
RHO-201ENST00000296271 PRDM6Q9NQX0 595 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 RBFOX1Q9NWB1 397 aaKnown RBP10.69□□□□□ -0.7
RHO-201ENST00000296271 EPHA6Q9UF33 1036 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 HIF3AQ9Y2N7 669 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 FRG2CA6NGY1 282 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 ARPC3O15145 178 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 ARHGEF9O43307 516 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 NDUFB5O43674 189 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 HLA-DQB1P01920 261 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 CD14P08571 375 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 GAAP10253 952 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 EPXP11678 715 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 IL12BP29460 328 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 NUDT1P36639 197 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 ACTC1P68032 377 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 ACTA1P68133 377 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 PLCXD2Q0VAA5 305 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 PLA2G7Q13093 441 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 GGTLC2Q14390 218 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 Q5BKY6 102 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 PLET1Q6UQ28 207 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 DPY19L4Q7Z388 723 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 JAZF1Q86VZ6 243 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 SDR16C5Q8N3Y7 309 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 GALNT6Q8NCL4 622 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 OR7G1Q8NGA0 311 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 OR51A4Q8NGJ6 313 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 OR8K3Q8NH51 312 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 GPR119Q8TDV5 335 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 TRIM63Q969Q1 353 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 ZNF501Q96CX3 271 aaPredicted RBP10.69□□□□□ -0.7
RHO-201ENST00000296271 OMA1Q96E52 524 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 CTRCQ99895 268 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 WWTR1Q9GZV5 400 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 AKIRIN1Q9H9L7 192 aaPredicted RBP10.69□□□□□ -0.7
RHO-201ENST00000296271 MRM2Q9UI43 246 aaKnown RBP10.69□□□□□ -0.7
RHO-201ENST00000296271 KLHL21Q9UJP4 597 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 NOX1Q9Y5S8 564 aa10.69□□□□□ -0.7
RHO-201ENST00000296271 SDK2Q58EX2 2172 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 TRAV6A0A075B6T7 132 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 CPED1A4D0V7 1026 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 PPM1BO75688 479 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 GLCEO94923 617 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 GUSBP08236 651 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 SYPP08247 313 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 AHCYP23526 432 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 UQCRC1P31930 480 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 INPP1P49441 399 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 RPS15P62841 145 aaKnown RBP10.68□□□□□ -0.7
RHO-201ENST00000296271 SLC35D2Q76EJ3 337 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 D2HGDHQ8N465 521 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 ZNF527Q8NB42 609 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 LGALS14Q8TCE9 139 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 ADAMTS18Q8TE60 1221 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 DUSP19Q8WTR2 217 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 ITFG2Q969R8 447 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 CCDC74AQ96AQ1 378 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 MSANTD3Q96H12 275 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 ZNF578Q96N58 590 aaPredicted RBP10.68□□□□□ -0.7
RHO-201ENST00000296271 AUNIPQ9H7T9 357 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 SYNDIG1Q9H7V2 258 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 TAS2R5Q9NYW4 299 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 PCDHGB7Q9Y5F8 929 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 NUP210LQ5VU65 1888 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 RTTNQ86VV8 2226 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 HMX3A6NHT5 357 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 SLC19A2O60779 497 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 WNT11O96014 354 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 GALP22466 123 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 BTCP35070 178 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 PITPNBP48739 271 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 POU4F2Q12837 409 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 ELAVL1Q15717 326 aaKnown RBP10.68□□□□□ -0.7
RHO-201ENST00000296271 MEP1BQ16820 701 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 ZFP69Q49AA0 526 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 LIPNQ5VXI9 398 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 TMEM53Q6P2H8 277 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 COX15Q7KZN9 410 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 NANOGNBQ7Z5D8 188 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 LRRC28Q86X40 367 aaPredicted RBP10.68□□□□□ -0.7
RHO-201ENST00000296271 OR6N2Q8NGY6 317 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 RXFP3Q9NSD7 469 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 GRHPRQ9UBQ7 328 aa10.68□□□□□ -0.7
RHO-201ENST00000296271 NUDT21O43809 227 aaKnown RBP10.67□□□□□ -0.7
RHO-201ENST00000296271 DUX1O43812 170 aa10.67□□□□□ -0.7
RHO-201ENST00000296271 IDH3BO43837 385 aa10.67□□□□□ -0.7
RHO-201ENST00000296271 TSPAN2O60636 221 aa10.67□□□□□ -0.7
RHO-201ENST00000296271 OPN1LWP04000 364 aa10.67□□□□□ -0.7
RHO-201ENST00000296271 ANKRD34CP0C6C1 535 aa10.67□□□□□ -0.7
RHO-201ENST00000296271 HLA-DOBP13765 273 aa10.67□□□□□ -0.7
RHO-201ENST00000296271 NPR2P20594 1047 aa10.67□□□□□ -0.7
RHO-201ENST00000296271 SDHAP31040 664 aa10.67□□□□□ -0.7
RHO-201ENST00000296271 HOXD12P35452 270 aa10.67□□□□□ -0.7
RHO-201ENST00000296271 TAS2R43P59537 309 aa10.67□□□□□ -0.7
RHO-201ENST00000296271 PRPS1P60891 318 aa10.67□□□□□ -0.7
RHO-201ENST00000296271 ZNF684Q5T5D7 378 aa10.67□□□□□ -0.7
RHO-201ENST00000296271 HLA-DQA1Q5Y7H0 255 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms