RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 CDH20Q9HBT6 801 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 GJE1A6NN92 205 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 GFYI3L273 518 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 GPR75O95800 540 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 MYF5P13349 255 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 SNU13P55769 128 aaKnown RBP12.41□□□□□ -0.42
HPS3-201ENST00000296051 OCLNQ16625 522 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 LCN10Q6JVE6 187 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 BAIAP2L2Q6UXY1 529 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 GRAMD2AQ8IUY3 354 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 ZNF511Q8NB15 262 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 RSC1A1Q92681 617 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 AMDHD1Q96NU7 426 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 MBTPS2O43462 519 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 SSX5O60225 188 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 PRAF2O60831 178 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 F13BP05160 661 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 PTHLHP12272 177 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 RAP2BP61225 183 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 PPP2CBP62714 309 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 PPP2CAP67775 309 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 CXADRP78310 365 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 ZNF440Q8IYI8 595 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 IFI44Q8TCB0 444 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 BMFQ96LC9 184 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 MS4A4EQ96PG1 132 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 SLC35A3Q9Y2D2 325 aa12.41□□□□□ -0.42
HPS3-201ENST00000296051 TMEM72A0PK05 275 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 TLCD2A6NGC4 264 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 SLCO2B1O94956 709 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 CPEP16870 476 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 AGTR1P30556 359 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 CRYBB2P43320 205 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 B4GALNT1Q00973 533 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 HEPHL1Q6MZM0 1159 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 ABHD5Q8WTS1 349 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 MAFIPQ8WZ33 124 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 ZNF285Q96NJ3 590 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 EIF5A2Q9GZV4 153 aaKnown RBP12.4□□□□□ -0.42
HPS3-201ENST00000296051 C20orf85Q9H1P6 137 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 MAN2C1Q9NTJ4 1040 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 SDHAF2Q9NX18 166 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 TMEM129A0AVI4 362 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 H3BUI4 141 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 TMPRSS11DO60235 418 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 POU4F2Q12837 409 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 OR2L8Q8NGY9 312 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 S100PBPQ96BU1 408 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 SEMA4CQ9C0C4 833 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 RNF32Q9H0A6 362 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 HRH4Q9H3N8 390 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 WASH6PQ9NQA3 447 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 TBC1D29Q9UFV1 150 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 TEX51A0A1B0GUA7 166 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 ZNF250P15622 560 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 MTNR1BP49286 362 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 POU3F4P49335 361 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 EIF5AP63241 154 aaKnown RBP12.4□□□□□ -0.42
HPS3-201ENST00000296051 IFITM2Q01629 132 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 TGFBR3Q03167 851 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 RAB11BQ15907 218 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 SPIN3Q5JUX0 258 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 OTPQ5XKR4 325 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 UEVLDQ8IX04 471 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 CCL4L1Q8NHW4 92 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 PHIPQ8WWQ0 1821 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 AKAP6Q13023 2319 aa12.4□□□□□ -0.42
HPS3-201ENST00000296051 C4orf47A7E2U8 309 aa12.4□□□□□ -0.43
HPS3-201ENST00000296051 ZNF749O43361 778 aa12.4□□□□□ -0.43
HPS3-201ENST00000296051 PIPP12273 146 aaPredicted RBP12.4□□□□□ -0.43
HPS3-201ENST00000296051 KCNAB1Q14722 419 aa12.4□□□□□ -0.43
HPS3-201ENST00000296051 FAM69AQ5T7M9 428 aa12.4□□□□□ -0.43
HPS3-201ENST00000296051 GDF7Q7Z4P5 450 aa12.4□□□□□ -0.43
HPS3-201ENST00000296051 SLC38A6Q8IZM9 456 aa12.4□□□□□ -0.43
HPS3-201ENST00000296051 DNAAF1Q8NEP3 725 aa12.4□□□□□ -0.43
HPS3-201ENST00000296051 OR52I2Q8NH67 350 aa12.4□□□□□ -0.43
HPS3-201ENST00000296051 DCUN1D4Q92564 292 aa12.4□□□□□ -0.43
HPS3-201ENST00000296051 NMNAT3Q96T66 252 aa12.4□□□□□ -0.43
HPS3-201ENST00000296051 SMOC1Q9H4F8 434 aa12.4□□□□□ -0.43
HPS3-201ENST00000296051 AUNIPQ9H7T9 357 aa12.4□□□□□ -0.43
HPS3-201ENST00000296051 ABRACLQ9P1F3 81 aa12.4□□□□□ -0.43
HPS3-201ENST00000296051 BOKQ9UMX3 212 aaPredicted RBP12.4□□□□□ -0.43
HPS3-201ENST00000296051 ZNF443Q9Y2A4 671 aaPredicted RBP12.4□□□□□ -0.43
HPS3-201ENST00000296051 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.4□□□□□ -0.43
HPS3-201ENST00000296051 TTC28Q96AY4 2481 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 FADS1O60427 444 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 ZNF16P17020 682 aaPredicted RBP12.39□□□□□ -0.43
HPS3-201ENST00000296051 SIRPAP78324 504 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 ABCA11PQ4W5N1 156 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 ADAMTSL4Q6UY14 1074 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 MS4A8Q9BY19 250 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 POLE3Q9NRF9 147 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 ZNF701Q9NV72 531 aaPredicted RBP12.39□□□□□ -0.43
HPS3-201ENST00000296051 A0A1W2PPC4 97 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 TXNL1O43396 289 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 IRF2P14316 349 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 S100A2P29034 98 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 HTR1FP30939 366 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 CLDN20P56880 219 aa12.39□□□□□ -0.43
HPS3-201ENST00000296051 FOXK2Q01167 660 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms