RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 GTPBP8Q8N3Z3 284 aaPredicted RBP20.58■□□□□ 0.88
PTX3-201ENST00000295927 TMEM99Q8N816 258 aa20.58■□□□□ 0.88
PTX3-201ENST00000295927 CLEC1AQ8NC01 280 aa20.58■□□□□ 0.88
PTX3-201ENST00000295927 OR51L1Q8NGJ5 315 aa20.58■□□□□ 0.88
PTX3-201ENST00000295927 RPL3LQ92901 407 aaKnown RBP20.58■□□□□ 0.88
PTX3-201ENST00000295927 ADGRL4Q9HBW9 690 aa20.58■□□□□ 0.88
PTX3-201ENST00000295927 RPH3AQ9Y2J0 694 aaPredicted RBP20.58■□□□□ 0.88
PTX3-201ENST00000295927 FAM186AA6NE01 2351 aa20.58■□□□□ 0.88
PTX3-201ENST00000295927 LIPT2A6NK58 231 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 CBR3O75828 277 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 OPN1LWP04000 364 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 MRPL3P09001 348 aaKnown RBP20.57■□□□□ 0.88
PTX3-201ENST00000295927 SBK2P0C263 348 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 SPI1P17947 270 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 GADD45AP24522 165 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 GTF2E2P29084 291 aaKnown RBP20.57■□□□□ 0.88
PTX3-201ENST00000295927 LSM3P62310 102 aaKnown RBP20.57■□□□□ 0.88
PTX3-201ENST00000295927 MYBPHQ13203 477 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 SELENBP1Q13228 472 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 GLYR1Q49A26 553 aaPredicted RBP20.57■□□□□ 0.88
PTX3-201ENST00000295927 ACBD7Q8N6N7 88 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 SCAIQ8N9R8 606 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 ZNRF4Q8WWF5 429 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 LRFN1Q9P244 771 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 C12orf71A8MTZ7 269 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 PLGP00747 810 aaPredicted RBP20.57■□□□□ 0.88
PTX3-201ENST00000295927 CD96P40200 585 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 CD79BP40259 229 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 LGALS3BPQ08380 585 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 SPCS2Q15005 226 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 ZMYND19Q96E35 227 aaPredicted RBP20.57■□□□□ 0.88
PTX3-201ENST00000295927 RPRD1BQ9NQG5 326 aaKnown RBP20.57■□□□□ 0.88
PTX3-201ENST00000295927 DKKL1Q9UK85 242 aa20.57■□□□□ 0.88
PTX3-201ENST00000295927 MS4A18H0YCH9 400 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 CCRL2O00421 344 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 SLC30A4O14863 429 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 ZIC3O60481 467 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 C19orf57Q0VDD7 668 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 MLLT11Q13015 90 aaPredicted RBP20.56■□□□□ 0.88
PTX3-201ENST00000295927 LSAMPQ13449 338 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 PON3Q15166 354 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 SSX1Q16384 188 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 ACKR1Q16570 336 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 MS4A18Q3C1V0 323 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 H1FNTQ75WM6 255 aaPredicted RBP20.56■□□□□ 0.88
PTX3-201ENST00000295927 ARIH2OSQ8N7S6 290 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 SLC25A43Q8WUT9 341 aaPredicted RBP20.56■□□□□ 0.88
PTX3-201ENST00000295927 GATAD2BQ8WXI9 593 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 NXPE2Q96DL1 559 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 TBX5Q99593 518 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 ALKBH4Q9NXW9 302 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 ABI3Q9P2A4 366 aa20.56■□□□□ 0.88
PTX3-201ENST00000295927 VGLL3A8MV65 326 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 SHC1P29353 583 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 SLC25A1P53007 311 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 RPL27P61353 136 aaKnown RBP20.55■□□□□ 0.88
PTX3-201ENST00000295927 VBP1P61758 197 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 PUDPQ08623 228 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 ZP4Q12836 540 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 POU4F2Q12837 409 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 SLC35D3Q5M8T2 416 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 LCN1P1Q5VSP4 162 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 SPINK14Q6IE38 97 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 TUBA3EQ6PEY2 450 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 KDM8Q8N371 416 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 KLHL36Q8N4N3 616 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 EXD3Q8N9H8 876 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 ZNF485Q8NCK3 441 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 OR10H4Q8NGA5 316 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 SMPDL3BQ92485 455 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 OR5B2Q96R09 309 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 TXNIPQ9H3M7 391 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 CHST11Q9NPF2 352 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 DEPPQ9NTK1 212 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 FREM3P0C091 2139 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 NCKAP5O14513 1909 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 H7C1C5 153 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 AIREO43918 545 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 FKBP2P26885 142 aaKnown RBP20.55■□□□□ 0.88
PTX3-201ENST00000295927 CASRP41180 1078 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 DIO1P49895 249 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 GPR85P60893 370 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 LCN6P62502 163 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 SRSF6Q13247 344 aaKnown RBP20.55■□□□□ 0.88
PTX3-201ENST00000295927 C19orf48Q6RUI8 117 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 ATCAYQ86WG3 371 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 TM9SF4Q92544 642 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 TSSK2Q96PF2 358 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 UTP23Q9BRU9 249 aaKnown RBP20.55■□□□□ 0.88
PTX3-201ENST00000295927 TIMMDC1Q9NPL8 285 aa20.55■□□□□ 0.88
PTX3-201ENST00000295927 A0A1W2PNR3 127 aa20.54■□□□□ 0.88
PTX3-201ENST00000295927 SLC22A1O15245 554 aa20.54■□□□□ 0.88
PTX3-201ENST00000295927 ARHGEF9O43307 516 aa20.54■□□□□ 0.88
PTX3-201ENST00000295927 FZD7O75084 574 aa20.54■□□□□ 0.88
PTX3-201ENST00000295927 NEURL1O76050 574 aa20.54■□□□□ 0.88
PTX3-201ENST00000295927 AKR7A3O95154 331 aa20.54■□□□□ 0.88
PTX3-201ENST00000295927 IGHMP01871 453 aa20.54■□□□□ 0.88
PTX3-201ENST00000295927 ZNF182P17025 639 aaPredicted RBP20.54■□□□□ 0.88
PTX3-201ENST00000295927 SFTPDP35247 375 aa20.54■□□□□ 0.88
PTX3-201ENST00000295927 ACVR1BP36896 505 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms