RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 GHDCQ8N2G8 530 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 LRRC75AQ8NAA5 344 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 LSM14AQ8ND56 463 aaKnown RBP8.29□□□□□ -1.08
PDPN-201ENST00000294489 SNX33Q8WV41 574 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 WDFY2Q96P53 400 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 DDOQ99489 341 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 CCDC32Q9BV29 185 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 NMNAT2Q9BZQ4 307 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 ETAA1Q9NY74 926 aa8.29□□□□□ -1.08
PDPN-201ENST00000294489 PTRH2Q9Y3E5 179 aaKnown RBP8.29□□□□□ -1.08
PDPN-201ENST00000294489 PCNX3Q9H6A9 2034 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 CCDC187A0A096LP49 1063 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 TMED7-TICAM2A0A0A6YYA0 188 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 TEX51A0A1B0GUA7 166 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 PMS2P1A4D2B8 440 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 C17orf51A8MQB3 221 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 A8MVM7 634 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 NPIPB7O75200 414 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 GLCEO94923 617 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 TXNDC12O95881 172 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 MT-CO3P00414 261 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 F13BP05160 661 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 PYCR1P32322 319 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 NAA10P41227 235 aaPredicted RBP8.28□□□□□ -1.08
PDPN-201ENST00000294489 PSMD7P51665 324 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 SLC25A1P53007 311 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 FBXW4P57775 412 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 KRR1Q13601 381 aaKnown RBP8.28□□□□□ -1.08
PDPN-201ENST00000294489 COL28A1Q2UY09 1125 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 FAM69AQ5T7M9 428 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 VASNQ6EMK4 673 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 C5orf46Q6UWT4 87 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 NDUFAF7Q7L592 441 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 LYSMD2Q8IV50 215 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 SYS1Q8N2H4 156 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 RPRD1BQ9NQG5 326 aaKnown RBP8.28□□□□□ -1.08
PDPN-201ENST00000294489 PLEKHB1Q9UF11 243 aaPredicted RBP8.28□□□□□ -1.08
PDPN-201ENST00000294489 MOKQ9UQ07 419 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 TMED7Q9Y3B3 224 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 WDFY4Q6ZS81 3184 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 ANKUB1A6NFN9 424 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 TNFRSF10AO00220 468 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 CDKN2AP42771 156 aaKnown RBP8.28□□□□□ -1.08
PDPN-201ENST00000294489 TGM4P49221 684 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 GBX2P52951 348 aaPredicted RBP8.28□□□□□ -1.08
PDPN-201ENST00000294489 DEFA1P59665 94 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 DEFA3P59666 94 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 HSF2Q03933 536 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 SPEM2Q0P670 501 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 SLC25A53Q5H9E4 307 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 LAX1Q8IWV1 398 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 DND1Q8IYX4 353 aaKnown RBP8.28□□□□□ -1.08
PDPN-201ENST00000294489 OR6S1Q8NH40 331 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 SMAP2Q8WU79 429 aaPredicted RBP8.28□□□□□ -1.08
PDPN-201ENST00000294489 ALG12Q9BV10 488 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 SH2D2AQ9NP31 389 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 PADI1Q9ULC6 663 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 ZMIZ1Q9ULJ6 1067 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 SIRT4Q9Y6E7 314 aaPredicted RBP8.28□□□□□ -1.08
PDPN-201ENST00000294489 SDK2Q58EX2 2172 aa8.28□□□□□ -1.08
PDPN-201ENST00000294489 SLC35F4A4IF30 521 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 C4orf47A7E2U8 309 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 RENP00797 406 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 TFP02787 698 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 BGLAPP02818 100 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 CFL1P23528 166 aaKnown RBP8.27□□□□□ -1.08
PDPN-201ENST00000294489 GTF2E2P29084 291 aaKnown RBP8.27□□□□□ -1.08
PDPN-201ENST00000294489 FOLR3P41439 243 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 SLC3A1Q07837 685 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 CHAF1BQ13112 559 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 DNASE1L3Q13609 305 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 FAM69BQ5VUD6 431 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 STEAP3Q658P3 488 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 H3F3CQ6NXT2 135 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 TMEM91Q6ZNR0 172 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 PPP1R32Q7Z5V6 425 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 SLC22A16Q86VW1 577 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 MS4A15Q8N5U1 240 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 POC5Q8NA72 575 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 PRSS33Q8NF86 280 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 OR11G2Q8NGC1 345 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 SLC22A8Q8TCC7 542 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 ZPLD1Q8TCW7 415 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 STK35Q8TDR2 534 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 SLC25A36Q96CQ1 311 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 DCLRE1CQ96SD1 692 aaKnown RBP8.27□□□□□ -1.08
PDPN-201ENST00000294489 CPNE5Q9HCH3 593 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 ABCB9Q9NP78 766 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 RHBDL2Q9NX52 303 aa8.27□□□□□ -1.08
PDPN-201ENST00000294489 E9PI62 339 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 OR2T1O43869 369 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 OR6A2O95222 327 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 AHSA1O95433 338 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 MSX1P28360 303 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 MTNR1BP49286 362 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 HCCSP53701 268 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 TP53I3Q53FA7 332 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 C1orf140Q5VVS0 124 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 SSX6Q7RTT6 188 aa8.27□□□□□ -1.09
PDPN-201ENST00000294489 ADGRG3Q86Y34 549 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms