RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ABHD5Q8WTS1 349 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 FCRL1Q96LA6 429 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 UTP23Q9BRU9 249 aaKnown RBP11.82□□□□□ -0.52
PTCD1-201ENST00000292478 EHFQ9NZC4 300 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 STEAP1Q9UHE8 339 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 NDRG4Q9ULP0 352 aaKnown RBP11.82□□□□□ -0.52
PTCD1-201ENST00000292478 MMP17Q9ULZ9 603 aa11.82□□□□□ -0.52
PTCD1-201ENST00000292478 CITO14578 2027 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 TMEM82A0PJX8 343 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 MEIS3P1A6NDR6 274 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 SOCS6O14544 535 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 PRKRAO75569 313 aaKnown RBP11.81□□□□□ -0.52
PTCD1-201ENST00000292478 HLA-AP01891 365 aaKnown RBP11.81□□□□□ -0.52
PTCD1-201ENST00000292478 TK1P04183 234 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 CHRM4P08173 479 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 NID1P14543 1247 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 CYHR1Q6ZMK1 362 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 COX15Q7KZN9 410 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 GRINAQ7Z429 371 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 NRARPQ7Z6K4 114 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 ACBD4Q8NC06 268 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 MCOLN1Q9GZU1 580 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 NXF5Q9H1B4 397 aaKnown RBP11.81□□□□□ -0.52
PTCD1-201ENST00000292478 ISYNA1Q9NPH2 558 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 WASH6PQ9NQA3 447 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 SIPA1L3O60292 1781 aaPredicted RBP11.81□□□□□ -0.52
PTCD1-201ENST00000292478 TMEM202A6NGA9 273 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 ACOD1A6NK06 481 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 PAPLNO95428 1278 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 DBHP09172 617 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 TEAD1P28347 426 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 SHC1P29353 583 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 HTR5AP47898 357 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 OR5M10Q6IEU7 315 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 OR4K15Q8NH41 348 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 LGALS14Q8TCE9 139 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 TMEM59Q9BXS4 323 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 BCL2L10Q9HD36 194 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 TNRC6CQ9HCJ0 1690 aaKnown RBP11.81□□□□□ -0.52
PTCD1-201ENST00000292478 HMGN4O00479 90 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 POU3F3P20264 500 aaPredicted RBP11.81□□□□□ -0.52
PTCD1-201ENST00000292478 ECI1P42126 302 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 TNK1Q13470 666 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 MSMO1Q15800 293 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 SLC36A2Q495M3 483 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 TMEM240Q5SV17 173 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 CD163Q86VB7 1156 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 PIGCQ92535 297 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 TMEM106AQ96A25 262 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 LRFN1Q9P244 771 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 PISDQ9UG56 409 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
PTCD1-201ENST00000292478 KIAA1551Q9HCM1 1747 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 OR6C76A6NM76 312 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 NAGAP17050 411 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 CLDN6P56747 220 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 PEA15Q15121 130 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 LPCAT3Q6P1A2 487 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 ZNF585AQ6P3V2 769 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 OVCH1Q7RTY7 1134 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 ZNF576Q9H609 170 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 FGF22Q9HCT0 170 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 B3GNT2Q9NY97 397 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 BMP1P13497 986 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 CD53P19397 219 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 SLC35A2P78381 396 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 COL9A2Q14055 689 aaPredicted RBP11.81□□□□□ -0.52
PTCD1-201ENST00000292478 EMC4Q5J8M3 183 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 NPSR1Q6W5P4 371 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 OR6M1Q8NGM8 313 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 HINT2Q9BX68 163 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 CHST8Q9H2A9 424 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 FBXO7Q9Y3I1 522 aa11.81□□□□□ -0.52
PTCD1-201ENST00000292478 BCORQ6W2J9 1755 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 PLSCR5A0PG75 271 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 ALOX12BO75342 701 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 DPP4P27487 766 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 APOBEC1P41238 236 aaKnown RBP11.8□□□□□ -0.52
PTCD1-201ENST00000292478 SEC61A1P61619 476 aaKnown RBP11.8□□□□□ -0.52
PTCD1-201ENST00000292478 SRPXP78539 464 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 DUSP8Q13202 625 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 RBM39Q14498 530 aaKnown RBP11.8□□□□□ -0.52
PTCD1-201ENST00000292478 KIAA1958Q8N8K9 716 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 RAB3CQ96E17 227 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 ZNF681Q96N22 645 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 CDCA4Q9BXL8 241 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 TMEM30AQ9NV96 361 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 CXXC1Q9P0U4 656 aaPredicted RBP11.8□□□□□ -0.52
PTCD1-201ENST00000292478 C1orf196B1AJZ1 125 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 GPR171O14626 319 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 YY2O15391 372 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 EPHA1P21709 976 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 ENPP1P22413 925 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 CAV3P56539 151 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 GRB2P62993 217 aaKnown RBP11.8□□□□□ -0.52
PTCD1-201ENST00000292478 MFAP5Q13361 173 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 STEAP3Q658P3 488 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 MEX3BQ6ZN04 569 aaKnown RBP11.8□□□□□ -0.52
PTCD1-201ENST00000292478 SLC35D2Q76EJ3 337 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 ZNF679Q8IYX0 411 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms