RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 B4DXG7 233 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 C21orf140B9A014 251 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 C9orf172C9J069 976 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 PLA2G10O15496 165 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 NDUFB5O43674 189 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 PLPP2O43688 288 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 ICOSLGO75144 302 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 IFNGP01579 166 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 HK1P19367 917 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 SLC2A5P22732 501 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 HLA-DMAP28067 261 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 MAP2K3P46734 347 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 FOXL2P58012 376 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 QPRTQ15274 297 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 TAB1Q15750 504 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 BTBD16Q32M84 506 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 HBMQ6B0K9 141 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 WBP2NLQ6ICG8 309 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 TMEM53Q6P2H8 277 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 NDUFAF7Q7L592 441 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 NUP54Q7Z3B4 507 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 PRR22Q8IZ63 422 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 Q8N402 240 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 SLC37A3Q8NCC5 494 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 DUSP18Q8NEJ0 188 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 ENKURQ8TC29 256 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 ELP5Q8TE02 316 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 C8orf44Q96CB5 159 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 ST6GAL2Q96JF0 529 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 TIMP4Q99727 224 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 IFT27Q9BW83 186 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 MMP25Q9NPA2 562 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 MYOTQ9UBF9 498 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 TCFL5Q9UL49 500 aa15.27■□□□□ 0.03
CPSF4-201ENST00000292476 A0A1B0GWA3 101 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 FAM183AA6NL82 134 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 LRRTM2O43300 516 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 HPGDSO60760 199 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 PRKAR1AP10644 381 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 PNMTP11086 282 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 MYL9P24844 172 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 SLC6A6P31641 620 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 PLAURQ03405 335 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 RTL4Q6ZR62 310 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 TMEM99Q8N816 258 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 TEX19Q8NA77 164 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 NLGN4YQ8NFZ3 816 aaPredicted RBP15.26■□□□□ 0.03
CPSF4-201ENST00000292476 OR13C2Q8NGS9 318 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 DCLRE1CQ96SD1 692 aaKnown RBP15.26■□□□□ 0.03
CPSF4-201ENST00000292476 TEAD3Q99594 435 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 TMEM43Q9BTV4 400 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.26■□□□□ 0.03
CPSF4-201ENST00000292476 ATP13A2Q9NQ11 1180 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 RBFOX1Q9NWB1 397 aaKnown RBP15.26■□□□□ 0.03
CPSF4-201ENST00000292476 IL20RAQ9UHF4 553 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 HS3ST3B1Q9Y662 390 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 FREM2Q5SZK8 3169 aa15.26■□□□□ 0.03
CPSF4-201ENST00000292476 NSG1A0A0A6YYJ2 146 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 TEX51A0A1B0GUA7 166 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 CD8B2A6NJW9 211 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 IDH3BO43837 385 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 SBK2P0C263 348 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 GSTT2P0CG29 244 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 GSTT2BP0CG30 244 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 SAGP10523 405 aaPredicted RBP15.25■□□□□ 0.03
CPSF4-201ENST00000292476 CD8BP10966 210 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 PEPDP12955 493 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 SKP2Q13309 424 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.25■□□□□ 0.03
CPSF4-201ENST00000292476 ZFP69Q49AA0 526 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 THSD4Q6ZMP0 1018 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 LRRC28Q86X40 367 aaPredicted RBP15.25■□□□□ 0.03
CPSF4-201ENST00000292476 DND1Q8IYX4 353 aaKnown RBP15.25■□□□□ 0.03
CPSF4-201ENST00000292476 CADM2Q8N3J6 435 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 OR5W2Q8NH69 310 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 CT55Q8WUE5 264 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 SLC7A6Q92536 515 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 PTP4A1Q93096 173 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 IMMP1LQ96LU5 166 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 KCNJ15Q99712 375 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 TTYH2Q9BSA4 534 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 SLC19A3Q9BZV2 496 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 ISG20L2Q9H9L3 353 aaKnown RBP15.25■□□□□ 0.03
CPSF4-201ENST00000292476 C12orf10Q9HB07 376 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 MEPEQ9NQ76 525 aaPredicted RBP15.25■□□□□ 0.03
CPSF4-201ENST00000292476 N6AMT1Q9Y5N5 214 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 NOX1Q9Y5S8 564 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 IGF2RP11717 2491 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 MAP1BP46821 2468 aaKnown RBP15.25■□□□□ 0.03
CPSF4-201ENST00000292476 SHISA3A0PJX4 238 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 PMS2P1A4D2B8 440 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 PRKNO60260 465 aaPredicted RBP15.25■□□□□ 0.03
CPSF4-201ENST00000292476 COX6A1P12074 109 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 CD82P27701 267 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 EVI2BP34910 448 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 CAV3P56539 151 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 HACD4Q5VWC8 232 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 PLET1Q6UQ28 207 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 PAMR1Q6UXH9 720 aa15.25■□□□□ 0.03
CPSF4-201ENST00000292476 LINC00114Q6XXX2 140 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms