RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TEAD1P28347 426 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 SLX4IPQ5VYV7 408 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 ZNF511Q8NB15 262 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 GJC3Q8NFK1 279 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 ZFAND2BQ8WV99 257 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 TMEM106AQ96A25 262 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 TMIGD2Q96BF3 282 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 ENPP5Q9UJA9 477 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 MED16Q9Y2X0 877 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 CD300LBA8K4G0 201 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 PIAS2O75928 621 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 SLC22A5O76082 557 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 CD40LGP29965 261 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 GAB1Q13480 694 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 GPR157Q5UAW9 335 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 MEX3BQ6ZN04 569 aaKnown RBP17.07■□□□□ 0.32
PCDH1-201ENST00000287008 ZNF836Q6ZNA1 936 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 ESPNLQ6ZVH7 1005 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 B3GNT8Q7Z7M8 397 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 Q96M85 177 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 CHST8Q9H2A9 424 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 OLAHQ9NV23 265 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 GMPR2Q9P2T1 348 aaKnown RBP17.07■□□□□ 0.32
PCDH1-201ENST00000287008 SMCHD1A6NHR9 2005 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 MCRIP1C9JLW8 97 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 SLC1A3P43003 542 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 NPSR1Q6W5P4 371 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 LINC00346Q8IVM7 164 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 FAM83FQ8NEG4 500 aaPredicted RBP17.07■□□□□ 0.32
PCDH1-201ENST00000287008 PRR14Q9BWN1 585 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 POMT2Q9UKY4 750 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 A0A0G2JMP0 313 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 PRAMEF27A3QJZ7 478 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 ZNF780AO75290 641 aaPredicted RBP17.07■□□□□ 0.32
PCDH1-201ENST00000287008 BTG2P78543 158 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 ZNF616Q08AN1 781 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 OR4M2Q8NGB6 313 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 GNG12Q9UBI6 72 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 SC5DO75845 299 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 AKR7A3O95154 331 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 RAB40ALP0C0E4 278 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 ARF1P84077 181 aaKnown RBP17.07■□□□□ 0.32
PCDH1-201ENST00000287008 CMPK2Q5EBM0 449 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 BRIX1Q8TDN6 353 aaKnown RBP17.07■□□□□ 0.32
PCDH1-201ENST00000287008 RAB40AQ8WXH6 277 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 UBQLN3Q9H347 655 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 GHRLQ9UBU3 117 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 WDR37Q9Y2I8 494 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 SNX11Q9Y5W9 270 aa17.07■□□□□ 0.32
PCDH1-201ENST00000287008 CACNA1GO43497 2377 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 ACOD1A6NK06 481 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 CYB5BO43169 146 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 PRAMEF4O60810 478 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 NME1P15531 152 aaKnown RBP17.06■□□□□ 0.32
PCDH1-201ENST00000287008 S100A2P29034 98 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 DAPP51397 102 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 MAVSQ7Z434 540 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 SULF2Q8IWU5 870 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 KDM8Q8N371 416 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 DNAJC22Q8N4W6 341 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 OLIG1Q8TAK6 271 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 TEX37Q96LM6 180 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 LRRC61Q9BV99 259 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 ZDBF2Q9HCK1 2354 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 OTOL1A6NHN0 477 aaPredicted RBP17.06■□□□□ 0.32
PCDH1-201ENST00000287008 OR6C76A6NM76 312 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 CSO75390 466 aaKnown RBP17.06■□□□□ 0.32
PCDH1-201ENST00000287008 THBS1P07996 1170 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 FOXC1Q12948 553 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 DEFB109BQ30KR1 87 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 ESCO2Q56NI9 601 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 PELI3Q8N2H9 469 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 UTP4Q969X6 686 aaKnown RBP17.06■□□□□ 0.32
PCDH1-201ENST00000287008 DEFB127Q9H1M4 99 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 TAS2R3Q9NYW6 316 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 NDUFAF4Q9P032 175 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 FIGNL2A6NMB9 653 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 GAAP10253 952 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 LTBQ06643 244 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 MEP1BQ16820 701 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 PTRH1Q86Y79 214 aaKnown RBP17.06■□□□□ 0.32
PCDH1-201ENST00000287008 ZNF707Q96C28 371 aaPredicted RBP17.06■□□□□ 0.32
PCDH1-201ENST00000287008 TMEM59Q9BXS4 323 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 ZNF286AQ9HBT8 521 aa17.06■□□□□ 0.32
PCDH1-201ENST00000287008 BDKRB2P30411 391 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 IKZF1Q13422 519 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 HAGHLQ6PII5 290 aaPredicted RBP17.05■□□□□ 0.32
PCDH1-201ENST00000287008 CYHR1Q6ZMK1 362 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 ANKRD13BQ86YJ7 626 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 LILRA2Q8N149 483 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 PPT2Q9UMR5 302 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 MEIS3P1A6NDR6 274 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 IL1AP01583 271 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 ZGLP1P0C6A0 271 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 ARL3P36405 182 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 METTL11BQ5VVY1 283 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 FBXL6Q8N531 539 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 MIB2Q96AX9 1013 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 CSF3RQ99062 836 aa17.05■□□□□ 0.32
PCDH1-201ENST00000287008 PKMYT1Q99640 499 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms