RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 DVL3Q92997 716 aaPredicted RBP15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 TBC1D20Q96BZ9 403 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 SEC22CQ9BRL7 303 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 SLC6A17Q9H1V8 727 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 CHRDQ9H2X0 955 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 SLC6A20Q9NP91 592 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 SLC23A1Q9UHI7 598 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 A0A087WZY1 265 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 ZNF593O00488 134 aaPredicted RBP15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 ATG12O94817 140 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 MMP11P24347 488 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 HTR1FP30939 366 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 XAF1Q6GPH4 301 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 TANGO2Q6ICL3 276 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 USP51Q70EK9 711 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 PRICKLE2Q7Z3G6 844 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 IL1F10Q8WWZ1 152 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 C19orf12Q9NSK7 152 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 SLC22A23A1A5C7 686 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 CD300LBA8K4G0 201 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 NUDT19A8MXV4 375 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 FTCDNL1E5RQL4 147 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 PFN3P60673 137 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 CAMK2BQ13554 666 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 DEFB133Q30KQ1 61 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 SLC38A6Q8IZM9 456 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 IL22RA1Q8N6P7 574 aa15.26■□□□□ 0.03
SH3RF1-201ENST00000284637 H0YGG7 62 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 LILRB5O75023 590 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 GABRB1P18505 474 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 ZNF852Q6ZMS4 543 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 OR10R2Q8NGX6 335 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 TM4SF18Q96CE8 201 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 SLC19A3Q9BZV2 496 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 ZMAT3Q9HA38 289 aaKnown RBP15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 TNFRSF12AQ9NP84 129 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 PRSS38A1L453 326 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 STK17BO94768 372 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 FABP1P07148 127 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 UBE2KP61086 200 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 PRSS45Q7RTY3 260 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 MRPL21Q7Z2W9 205 aaKnown RBP15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 OR4K15Q8NH41 348 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 POC1BQ8TC44 478 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 HAS2Q92819 552 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 LIN37Q96GY3 246 aaPredicted RBP15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 ZNF681Q96N22 645 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 TMEM100Q9NV29 134 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 C5P01031 1676 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 TRIM77I1YAP6 450 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 NAT2P11245 290 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 PIPP12273 146 aaPredicted RBP15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 HOXC13P31276 330 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 ARRB2P32121 409 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 RPE65Q16518 533 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 Q499Y3 187 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 ABHD5Q8WTS1 349 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 MS4A8Q9BY19 250 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 SEMA4GQ9NTN9 838 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 ACOXLQ9NUZ1 547 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 PUS1Q9Y606 427 aaKnown RBP eCLIP15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 NRXN3Q9Y4C0 1643 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 CHRM4P08173 479 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 CSNK1A1P48729 337 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 UBE2NP61088 152 aaKnown RBP15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 RPS18P62269 152 aaKnown RBP15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 DEFB103AP81534 67 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 ZNF511Q8NB15 262 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 RAB3CQ96E17 227 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 AMDHD1Q96NU7 426 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 GCM1Q9NP62 436 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 SLC22A7Q9Y694 548 aa15.25■□□□□ 0.03
SH3RF1-201ENST00000284637 TCRBV5S2A0A599 114 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 SOCS7O14512 581 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 GDF7Q7Z4P5 450 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 RNF128Q8TEB7 428 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 TMEM38AQ9H6F2 299 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 CPNE7Q9UBL6 633 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 SCN11AQ9UI33 1791 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 K7EPK0 472 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 ONECUT3O60422 494 aaPredicted RBP15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 ITGB2P05107 769 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 ACSM4P0C7M7 580 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 HTR2CP28335 458 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 KIR2DL3P43628 341 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 FAM71E2Q8N5Q1 922 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 MIB2Q96AX9 1013 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 OR10A5Q9H207 317 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 OR10A2Q9H208 303 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 OR51B6Q9H340 312 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 HHATLQ9HCP6 504 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 CD79AP11912 226 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 TEAD1P28347 426 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 NAA40Q86UY6 237 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 EID2Q8N6I1 236 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 NANOGP1Q8N7R0 232 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 ASB17Q8WXJ9 295 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 TIMM29Q9BSF4 260 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 A4GALTQ9NPC4 353 aa15.24■□□□□ 0.03
SH3RF1-201ENST00000284637 FAM212BQ9NTI7 297 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms