RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 ITGA3P26006 1051 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 DPP4P27487 766 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 IDUAP35475 653 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 LIPAP38571 399 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 ETV1P50549 477 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 RPS3AP61247 264 aaKnown RBP13.09□□□□□ -0.31
TRIM23-202ENST00000274327 FOXK1P85037 733 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 ZP4Q12836 540 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 SELENBP1Q13228 472 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 CTF1Q16619 201 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 SLC6A19Q695T7 634 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 GPR139Q6DWJ6 353 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 C3orf33Q6P1S2 294 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 SHFQ7M4L6 423 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 GTPBP8Q8N3Z3 284 aaPredicted RBP13.09□□□□□ -0.31
TRIM23-202ENST00000274327 SCAIQ8N9R8 606 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 LSM14AQ8ND56 463 aaKnown RBP13.09□□□□□ -0.31
TRIM23-202ENST00000274327 ZNF417Q8TAU3 575 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 ZNF587Q96SQ5 575 aaPredicted RBP13.09□□□□□ -0.31
TRIM23-202ENST00000274327 ZNF649Q9BS31 505 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 RACGAP1Q9H0H5 632 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 OR51V1Q9H2C8 321 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 GVINP1Q7Z2Y8 2422 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 A0A0G2JMM0 328 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 A0A1W2PPB8 328 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 A0A1W2PRS3 328 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 TMEM129A0AVI4 362 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 LIPT2A6NK58 231 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 KIR3DP1A8MWS1 328 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 CBR3O75828 277 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 IGHMP01871 453 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 LIMS3P0CW19 117 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 LIMS4P0CW20 117 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 MYL12AP19105 171 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 FKBP2P26885 142 aaKnown RBP13.09□□□□□ -0.31
TRIM23-202ENST00000274327 CDKN2AP42771 156 aaKnown RBP13.09□□□□□ -0.31
TRIM23-202ENST00000274327 DNASE1L1P49184 302 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 MED22Q15528 200 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 KLHL12Q53G59 568 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 ABHD17BQ5VST6 288 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 EXD3Q8N9H8 876 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 OR5M1Q8NGP8 315 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 ZPLD1Q8TCW7 415 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 GNRHR2Q96P88 292 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 NMNAT3Q96T66 252 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 NEURL2Q9BR09 285 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 INIPQ9NRY2 104 aa13.09□□□□□ -0.31
TRIM23-202ENST00000274327 ZNF346Q9UL40 294 aaKnown RBP13.09□□□□□ -0.31
TRIM23-202ENST00000274327 OR6C68A6NDL8 312 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 CDK2AP1O14519 115 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 MYL12BO14950 172 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 ZIC3O60481 467 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 CD36P16671 472 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 CD96P40200 585 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 CLK1P49759 484 aaKnown RBP13.08□□□□□ -0.32
TRIM23-202ENST00000274327 SLC25A1P53007 311 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 NHLH1Q02575 133 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 OR7A5Q15622 319 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.08□□□□□ -0.32
TRIM23-202ENST00000274327 MESTQ5EB52 335 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 ARMCX4Q5H9R4 360 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 ATP1A1-AS1Q5TC04 95 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 LEG1Q6P5S2 330 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 TUBA3EQ6PEY2 450 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 B3GLCTQ6Y288 498 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 VASH2Q86V25 355 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 CLEC1AQ8NC01 280 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 ATP6V1C2Q8NEY4 427 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 OR51G2Q8NGK0 314 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 OR9Q1Q8NGQ5 310 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 SLC25A43Q8WUT9 341 aaPredicted RBP13.08□□□□□ -0.32
TRIM23-202ENST00000274327 OPALINQ96PE5 141 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 MGLLQ99685 303 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 FANCFQ9NPI8 374 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 DEPPQ9NTK1 212 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 ALKBH4Q9NXW9 302 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 LRFN1Q9P244 771 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 ABI3Q9P2A4 366 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 TNFRSF10DQ9UBN6 386 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 NCKAP5O14513 1909 aa13.08□□□□□ -0.32
TRIM23-202ENST00000274327 DMXL1Q9Y485 3027 aa13.07□□□□□ -0.32
TRIM23-202ENST00000274327 ISPDA4D126 451 aa13.07□□□□□ -0.32
TRIM23-202ENST00000274327 LRRC3CA6NJW4 275 aa13.07□□□□□ -0.32
TRIM23-202ENST00000274327 C11orf98E9PRG8 122 aa13.07□□□□□ -0.32
TRIM23-202ENST00000274327 MS4A18H0YCH9 400 aa13.07□□□□□ -0.32
TRIM23-202ENST00000274327 H3BML4 177 aa13.07□□□□□ -0.32
TRIM23-202ENST00000274327 NEURL1O76050 574 aa13.07□□□□□ -0.32
TRIM23-202ENST00000274327 GYPBP06028 91 aa13.07□□□□□ -0.32
TRIM23-202ENST00000274327 TFPIP10646 304 aa13.07□□□□□ -0.32
TRIM23-202ENST00000274327 ZNF17P17021 662 aa13.07□□□□□ -0.32
TRIM23-202ENST00000274327 CNR1P21554 472 aa13.07□□□□□ -0.32
TRIM23-202ENST00000274327 TCEA1P23193 301 aaKnown RBP13.07□□□□□ -0.32
TRIM23-202ENST00000274327 SRD5A2P31213 254 aa13.07□□□□□ -0.32
TRIM23-202ENST00000274327 SOX8P57073 446 aa13.07□□□□□ -0.32
TRIM23-202ENST00000274327 RPS7P62081 194 aaKnown RBP13.07□□□□□ -0.32
TRIM23-202ENST00000274327 OC90Q02509 493 aaPredicted RBP13.07□□□□□ -0.32
TRIM23-202ENST00000274327 DBPQ10586 325 aaPredicted RBP13.07□□□□□ -0.32
TRIM23-202ENST00000274327 SRSF6Q13247 344 aaKnown RBP13.07□□□□□ -0.32
TRIM23-202ENST00000274327 KRR1Q13601 381 aaKnown RBP13.07□□□□□ -0.32
TRIM23-202ENST00000274327 GGTLC2Q14390 218 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms