RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 ACOT11Q8WXI4 607 aaPredicted RBP16.31■□□□□ 0.2
SDF4-201ENST00000263741 DHRS1Q96LJ7 313 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 NAA11Q9BSU3 229 aaPredicted RBP16.31■□□□□ 0.2
SDF4-201ENST00000263741 C9orf16Q9BUW7 83 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 SFXN3Q9BWM7 321 aa16.31■□□□□ 0.2
SDF4-201ENST00000263741 OPN3Q9H1Y3 402 aaPredicted RBP16.31■□□□□ 0.2
SDF4-201ENST00000263741 DVL2O14641 736 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 GADD45GO95257 159 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 FASP25445 335 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 GPR4P46093 362 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 RPS6KA3P51812 740 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 IL1RL1Q01638 556 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 LAPTM4AQ15012 233 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 HMBOX1Q6NT76 420 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 FAM214BQ7L5A3 538 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 PIWIL3Q7Z3Z3 882 aaKnown RBP16.3■□□□□ 0.2
SDF4-201ENST00000263741 SLC43A2Q8N370 569 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 ASB5Q8WWX0 329 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 STARD4Q96DR4 205 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 CHID1Q9BWS9 393 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 SLC19A3Q9BZV2 496 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 CHST11Q9NPF2 352 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 A0A1W2PRQ8 180 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 SERPINI2O75830 405 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 CLDN14O95500 239 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 HPRP00739 348 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 MAKP20794 623 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 NTF4P34130 210 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 DGCR6Q14129 220 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 TMEM225Q6GV28 225 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 XKRXQ6PP77 449 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 LILRB4Q8NHJ6 448 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 SGTBQ96EQ0 304 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 NANSQ9NR45 359 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 ZNF629Q9UEG4 869 aaPredicted RBP16.3■□□□□ 0.2
SDF4-201ENST00000263741 RSL24D1Q9UHA3 163 aaKnown RBP16.3■□□□□ 0.2
SDF4-201ENST00000263741 EMC9Q9Y3B6 208 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 U3KQV3 271 aa16.3■□□□□ 0.2
SDF4-201ENST00000263741 HECTD1Q9ULT8 2610 aa16.29■□□□□ 0.2
SDF4-201ENST00000263741 CLDN1O95832 211 aa16.29■□□□□ 0.2
SDF4-201ENST00000263741 GRNP28799 593 aaKnown RBP16.29■□□□□ 0.2
SDF4-201ENST00000263741 OPRM1P35372 400 aa16.29■□□□□ 0.2
SDF4-201ENST00000263741 EXOC3L2Q2M3D2 409 aa16.29■□□□□ 0.2
SDF4-201ENST00000263741 KCTD21Q4G0X4 260 aa16.29■□□□□ 0.2
SDF4-201ENST00000263741 TMEM201Q5SNT2 666 aa16.29■□□□□ 0.2
SDF4-201ENST00000263741 BPIFA2Q96DR5 249 aa16.29■□□□□ 0.2
SDF4-201ENST00000263741 FAM46AQ96IP4 442 aaKnown RBP16.29■□□□□ 0.2
SDF4-201ENST00000263741 HS6ST2Q96MM7 605 aa16.29■□□□□ 0.2
SDF4-201ENST00000263741 FUZQ9BT04 418 aa16.29■□□□□ 0.2
SDF4-201ENST00000263741 ASPNQ9BXN1 380 aa16.29■□□□□ 0.2
SDF4-201ENST00000263741 BCO1Q9HAY6 547 aa16.29■□□□□ 0.2
SDF4-201ENST00000263741 B3GAT1Q9P2W7 334 aa16.29■□□□□ 0.2
SDF4-201ENST00000263741 C11orf98E9PRG8 122 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 FZD7O75084 574 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 YES1P07947 543 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 ESRRGP62508 458 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 PMS2P3Q13401 168 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 SLC17A1Q14916 467 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 GTF2IRD2BQ6EKJ0 949 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 MBOAT2Q6ZWT7 520 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 MAMDC2Q7Z304 686 aaPredicted RBP16.28■□□□□ 0.2
SDF4-201ENST00000263741 GTF2IRD2Q86UP8 949 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 OR4K5Q8NGD3 323 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 OR9K2Q8NGE7 335 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 CENPNQ96H22 339 aaPredicted RBP16.28■□□□□ 0.2
SDF4-201ENST00000263741 ZNF385AQ96PM9 386 aaKnown RBP16.28■□□□□ 0.2
SDF4-201ENST00000263741 ZNF347Q96SE7 839 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 FLVCR1Q9Y5Y0 555 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 LYVE1Q9Y5Y7 322 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 SAC3D1A6NKF1 404 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 C19orf84I3L1E1 186 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 OR7A10O76100 309 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 MT-ATP6P00846 226 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 IGHV3-9P01782 118 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 HLA-DOBP13765 273 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 IST1P53990 364 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 EEF1A1P5Q5VTE0 462 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 H1FNTQ75WM6 255 aaPredicted RBP16.28■□□□□ 0.2
SDF4-201ENST00000263741 ALPK1Q96QP1 1244 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 SLC29A1Q99808 456 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 ANKRD19PQ9H560 264 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 FKRPQ9H9S5 495 aa16.28■□□□□ 0.2
SDF4-201ENST00000263741 MRPL39Q9NYK5 338 aaKnown RBP16.28■□□□□ 0.2
SDF4-201ENST00000263741 IGKV3D-15A0A087WSY6 115 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 A0A087WXM4 84 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 SH3PXD2BA1X283 911 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 IL18BPO95998 194 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 CRHP06850 196 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 ASAH2BP0C7U1 165 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 ADORA3P0DMS8 318 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 AGAP20933 346 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 AHCYP23526 432 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 ALDH3B2P48448 385 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 SLC16A1P53985 500 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 SNTB1Q13884 538 aaKnown RBP16.27■□□□□ 0.2
SDF4-201ENST00000263741 OR2T5Q6IEZ7 315 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 NANOGNBQ7Z5D8 188 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 OR13C2Q8NGS9 318 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 OR6K3Q8NGY3 331 aa16.27■□□□□ 0.2
SDF4-201ENST00000263741 OR2T29Q8NH02 315 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms