RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 CCR7P32248 378 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 TCEAL1Q15170 157 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 PAPD4Q6PIY7 484 aaKnown RBP13.27□□□□□ -0.29
CUX2-201ENST00000261726 SYT13Q7L8C5 426 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 PIANPQ8IYJ0 282 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 ARV1Q9H2C2 271 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 TRBV4-1A0A0J9YWV2 114 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 hCG_1809904A0A1W2PP81 198 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 A0A1W2PPE2 198 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 A0A1W2PR64 198 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 A0A1W2PRV1 198 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 GSCP56915 257 aaPredicted RBP13.27□□□□□ -0.29
CUX2-201ENST00000261726 REEP6Q96HR9 211 aa13.27□□□□□ -0.29
CUX2-201ENST00000261726 KCNK2O95069 426 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 CD63P08962 238 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 RAB40ALP0C0E4 278 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 KCNJ10P78508 379 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 CPEB2Q7Z5Q1 589 aaKnown RBP13.26□□□□□ -0.29
CUX2-201ENST00000261726 SYT9Q86SS6 491 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 ADGRG5Q8IZF4 528 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 RAB40AQ8WXH6 277 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 TMX2-CTNND1H3BSU7 103 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 P2RY10O00398 339 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 AIFM1O95831 613 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 CPT2P23786 658 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 TRHRP34981 398 aaPredicted RBP13.26□□□□□ -0.29
CUX2-201ENST00000261726 ZNF468Q5VIY5 522 aaPredicted RBP13.26□□□□□ -0.29
CUX2-201ENST00000261726 IL17CQ9P0M4 197 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 ZNF816-ZNF321PA0A0X1KG74 233 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 I6L893 689 aaPredicted RBP13.26□□□□□ -0.29
CUX2-201ENST00000261726 MRPS14O60783 128 aaKnown RBP13.26□□□□□ -0.29
CUX2-201ENST00000261726 LTB4RQ15722 352 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 HNRNPA1L2Q32P51 320 aaKnown RBP13.26□□□□□ -0.29
CUX2-201ENST00000261726 PM20D1Q6GTS8 502 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 RANBP10Q6VN20 620 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 GCNT2Q8N0V5 402 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 SLC35G3Q8N808 338 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 C15orf54Q8N8G6 183 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 ZNF321PQ8N8H1 164 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 ANKRD10Q9NXR5 420 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 LHX6Q9UPM6 363 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 MICAL3Q7RTP6 2002 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 BLACEA4D250 179 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 ABHD16AO95870 558 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 AADACP22760 399 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 HTR2CP28335 458 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 BIDP55957 195 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 ACSM1Q08AH1 577 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 RBMS2Q15434 407 aaKnown RBP13.26□□□□□ -0.29
CUX2-201ENST00000261726 MPPED2Q15777 294 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 ADIRFQ15847 76 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 CTSL3PQ5NE16 218 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 BPIFCQ8NFQ6 507 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 NANPQ8TBE9 248 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 HAPLN2Q9GZV7 340 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 NIPAL2Q9H841 368 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 MYH6P13533 1939 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 ZNF728P0DKX0 622 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 HOXA11P31270 313 aaPredicted RBP13.26□□□□□ -0.29
CUX2-201ENST00000261726 SPCS2Q15005 226 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 ACTBL2Q562R1 376 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 TMEM31Q5JXX7 168 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 RPL22L1Q6P5R6 122 aaKnown RBP13.26□□□□□ -0.29
CUX2-201ENST00000261726 Q6ZPB1 254 aaPredicted RBP13.26□□□□□ -0.29
CUX2-201ENST00000261726 GPR150Q8NGU9 434 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 OR11A1Q9GZK7 315 aa13.26□□□□□ -0.29
CUX2-201ENST00000261726 UNCXA6NJT0 531 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 PPP3CBP16298 524 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 MLLT11Q13015 90 aaPredicted RBP13.25□□□□□ -0.29
CUX2-201ENST00000261726 ADIPOR2Q86V24 386 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 OR4Q3Q8NH05 313 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 DVL3Q92997 716 aaPredicted RBP13.25□□□□□ -0.29
CUX2-201ENST00000261726 SMIM14Q96QK8 99 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 ZNF732B4DXR9 585 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 H0YGG7 62 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 DDAH2O95865 285 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 FGF4P08620 206 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 CARD18P57730 90 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 RNF151Q2KHN1 245 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 Q6ZTK2 550 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 FAM58AQ8N1B3 248 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 KHSRPQ92945 711 aaKnown RBP eCLIP13.25□□□□□ -0.29
CUX2-201ENST00000261726 HRASLS5Q96KN8 279 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 CTRCQ99895 268 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 C10orf71Q711Q0 1435 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 GPR75O95800 540 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 OLFM2O95897 454 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 RPS25P62851 125 aaKnown RBP13.25□□□□□ -0.29
CUX2-201ENST00000261726 OR1J2Q8NGS2 313 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 LRRC15Q8TF66 581 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 GAB3Q8WWW8 586 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 SHARPINQ9H0F6 387 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 A0A0D9SG52 128 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 GASTP01350 101 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 EMP3P54852 163 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 FLI1Q01543 452 aaPredicted RBP13.25□□□□□ -0.29
CUX2-201ENST00000261726 RELAQ04206 551 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 PHLDA2Q53GA4 152 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 MARCH8Q5T0T0 291 aa13.25□□□□□ -0.29
CUX2-201ENST00000261726 RFPL4BQ6ZWI9 263 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms