RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 YIPF4Q9BSR8 244 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 SLC26A1Q9H2B4 701 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 EVA1AQ9H8M9 152 aa17.3■□□□□ 0.36
COL4A3BP-201ENST00000261415 VSTM2BA6NLU5 285 aa17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 L7N2F9 121 aa17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 HTR3BO95264 441 aa17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 GALNSP34059 522 aa17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 PCGF2P35227 344 aa17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 KHKP50053 298 aa17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 PSMD4P55036 377 aaKnown RBP17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 NSDHLQ15738 373 aa17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 MRPL14Q6P1L8 145 aaKnown RBP17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 C12orf45Q8N5I9 185 aaPredicted RBP17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 TPD52L3Q96J77 140 aa17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 MNTQ99583 582 aa17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 ACTR6Q9GZN1 396 aa17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 OR51M1Q9H341 326 aa17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 ADAP2Q9NPF8 381 aa17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 ERVK-19Q9WJR5 959 aa17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 RPL36Q9Y3U8 105 aaKnown RBP17.29■□□□□ 0.36
COL4A3BP-201ENST00000261415 CASKO14936 926 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 SSNA1O43805 119 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 STK17BO94768 372 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 TCRBP04435 133 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 ARAFP10398 606 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 CEACAM1P13688 526 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 STARP49675 285 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 KCNJ10P78508 379 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 RBBP4Q09028 425 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 ZNF630Q2M218 657 aaPredicted RBP17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 MFSD12Q6NUT3 480 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 FAM199XQ6PEV8 388 aaPredicted RBP17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 PLPP5Q8NEB5 264 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 MR1Q95460 341 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 ATF6BQ99941 703 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 NIPSNAP1Q9BPW8 284 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 THAP7Q9BT49 309 aaPredicted RBP17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 ACTRT3Q9BYD9 372 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 CDCP1Q9H5V8 836 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 C9orf172C9J069 976 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 HRKO00198 91 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 SUV39H1O43463 412 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 OR12D1P0DN82 309 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 S1PR1P21453 382 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 FGF9P31371 208 aaPredicted RBP17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 CD96P40200 585 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 ANXA11P50995 505 aaKnown RBP17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 SNRPGP62308 76 aaKnown RBP17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 EEF1A2Q05639 463 aaKnown RBP17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 SCARB2Q14108 478 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 LGI4Q8N135 537 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 NFKBIDQ8NI38 313 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 C1GALT1C1Q96EU7 318 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 MRPL48Q96GC5 212 aaKnown RBP17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 UBL7Q96S82 380 aaPredicted RBP17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 SPSB2Q99619 263 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 PTDSS2Q9BVG9 487 aa17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 PNO1Q9NRX1 252 aaKnown RBP17.28■□□□□ 0.36
COL4A3BP-201ENST00000261415 ZAR1LA6NP61 321 aa17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 C17orf105B2RV13 164 aa17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 IDSB3KWA1 339 aa17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 M0R129 80 aa17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 RFC3P40938 356 aa17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 NOVA1P51513 510 aaKnown RBP17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 PGDP52209 483 aa17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 SMSP52788 366 aa17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 CTBP2P56545 445 aa17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 CDK6Q00534 326 aa17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 WDR53Q7Z5U6 358 aaPredicted RBP17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 OR52R1Q8NGF1 315 aa17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 OR7D2Q96RA2 312 aa17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 A4GALTQ9NPC4 353 aa17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 GPR160Q9UJ42 338 aa17.27■□□□□ 0.36
COL4A3BP-201ENST00000261415 RAB19A4D1S5 217 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 ENTPD6O75354 484 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 EIF3GO75821 320 aaKnown RBP eCLIP17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 KDM4BO94953 1096 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 RLN2P04090 185 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 HEXBP07686 556 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 AHCYP23526 432 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 BTCP35070 178 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 DUSP8Q13202 625 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 SLC25A25Q6KCM7 469 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 CDC73Q6P1J9 531 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 ASB18Q6ZVZ8 466 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 OR4C15Q8NGM1 316 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 PTPMT1Q8WUK0 201 aaPredicted RBP17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 SLC38A5Q8WUX1 472 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 XAGE5Q8WWM1 108 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 ACOT12Q8WYK0 555 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 SPATA5L1Q9BVQ7 753 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 WDR54Q9H977 334 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 RLIMQ9NVW2 624 aa17.27■□□□□ 0.35
COL4A3BP-201ENST00000261415 G3V3Q6 166 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 RGS11O94810 467 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 BCHEP06276 602 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 GAAP10253 952 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 AQP1P29972 269 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 GPR143P51810 404 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 ELAVL1Q15717 326 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms