RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TSC22D3Q99576 134 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 SPATA9Q9BWV2 254 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 ZNF703Q9H7S9 590 aaPredicted RBP4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 GALNT8Q9NY28 637 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 STK17BO94768 372 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 SEC24DO94855 1032 aaPredicted RBP4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 GSTM2P28161 218 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 PRKAR1BP31321 381 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 HSD17B7P56937 341 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 VBP1P61758 197 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 FABP5Q01469 135 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 PRKCDQ05655 676 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 ILKQ13418 452 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 AMZ1Q400G9 498 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 MANEAQ5SRI9 462 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 C1QL2Q7Z5L3 287 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 C17orf64Q86WR6 236 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 POMGNT2Q8NAT1 580 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 DEFB124Q8NES8 71 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 MYDGFQ969H8 173 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 TRIM63Q969Q1 353 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 LGALS12Q96DT0 336 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 FBXO17Q96EF6 278 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 GRIP1Q9Y3R0 1128 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 A0A1B0GX78 115 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 GNG14A0A1W2PPG7 69 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 RAP2AP10114 183 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 RYKP34925 604 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 CAPZA1P52907 286 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 NUDT6P53370 316 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 RAB39AQ14964 217 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 TEX30Q5JUR7 227 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 SYT6Q5T7P8 510 aaPredicted RBP4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 C11orf53Q8IXP5 236 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 NDNFQ8TB73 568 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 TNFRSF13CQ96RJ3 184 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 KCTD14Q9BQ13 255 aaPredicted RBP4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 G6PC2Q9NQR9 355 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 ING3Q9NXR8 418 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 JKAMPQ9P055 326 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 TBC1D24Q9ULP9 559 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 WBP11Q9Y2W2 641 aaKnown RBP4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 TESMINQ9Y4I5 508 aa4.97□□□□□ -1.61
TOPBP1-201ENST00000260810 A0A0B4J203 849 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 C9J4A7 227 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 G3V3Y1 287 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 OPN1LWP04000 364 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 ACKR3P25106 362 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 PTGER4P35408 488 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 NCBP2P52298 156 aaKnown RBP eCLIP4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 CRYZQ08257 329 aaKnown RBP4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 ACSM2AQ08AH3 577 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 NFYCQ13952 458 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 CRMP1Q14194 572 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 MEP1BQ16820 701 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 C6orf141Q5SZD1 244 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 ACSM2BQ68CK6 577 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 SP5Q6BEB4 398 aaPredicted RBP4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 SLC30A6Q6NXT4 461 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 ZCCHC12Q6PEW1 402 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 PAMR1Q6UXH9 720 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 C3P1Q6ZMU1 363 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 OAFQ86UD1 273 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 ZDHHC21Q8IVQ6 265 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 OTULINQ96BN8 352 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 SLC25A38Q96DW6 304 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 HDHD5Q9BXW7 423 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 FRRS1LQ9P0K9 344 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 ANAPC2Q9UJX6 822 aa4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 EXOGQ9Y2C4 368 aaKnown RBP4.96□□□□□ -1.61
TOPBP1-201ENST00000260810 A0A096LNT2 108 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 CIB4A0PJX0 185 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 C2orf74A8MZ97 194 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 GTPBP1O00178 669 aaKnown RBP4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 COQ9O75208 318 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 CSO75390 466 aaKnown RBP4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 FASP25445 335 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 CFPP27918 469 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 GIPRP48546 466 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 ATP1A4Q13733 1029 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 CPTPQ5TA50 214 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 UBE2UQ5VVX9 321 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 OR4F15Q8NGB8 312 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 OR52I1Q8NGK6 324 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 RASD2Q96D21 266 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 BOD1Q96IK1 185 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 STACQ99469 402 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 NPDC1Q9NQX5 325 aaPredicted RBP4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 NPAP1Q9NZP6 1156 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 RSL24D1Q9UHA3 163 aaKnown RBP4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 PCDHGB7Q9Y5F8 929 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 FAT3Q8TDW7 4589 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 SRPX2O60687 465 aaPredicted RBP4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 PPP1R3DO95685 299 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 SCARB2Q14108 478 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 SLC17A1Q14916 467 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 PLAG1Q6DJT9 500 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 SIGIRRQ6IA17 410 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF773Q6PK81 442 aa4.96□□□□□ -1.62
TOPBP1-201ENST00000260810 LNX2Q8N448 690 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms