RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 NICN1Q9BSH3 213 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 NDUFAF4Q9P032 175 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF701M0R085 212 aaPredicted RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 HSD17B6O14756 317 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 LINC01565O15544 149 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 B4GAT1O43505 415 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 METAP1DQ6UB28 335 aaPredicted RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 TMEM64Q6YI46 380 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 NCCRP1Q6ZVX7 275 aaPredicted RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 LINC00346Q8IVM7 164 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 OR4A16Q8NH70 328 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 ZC3HAV1LQ96H79 300 aaKnown RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 SERTAD4Q9NUC0 356 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 SIPA1L3O60292 1781 aaPredicted RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 C17orf112F2Z3M2 114 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 BOLA2-SMG1P6H3BVE0 249 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 TNFRSF10CO14798 259 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 BET1O15155 118 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 GMDSO60547 372 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 OR2T7P0C7T2 308 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 GABRB3P28472 473 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 CD1CP29017 333 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 ZNF92Q03936 586 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 DMWDQ09019 674 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 CCSMST1Q4G0I0 132 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 SAXO2Q658L1 398 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 TSSK4Q6SA08 328 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 APOOLQ6UXV4 268 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 OR2T27Q8NH04 317 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 HIPK2Q9H2X6 1198 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 IGHV3-20A0A0C4DH32 117 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 MDFIC2A0A1B0GVS7 189 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 FZD7O75084 574 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 UBBP0CG47 229 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 HMGA1P17096 107 aaKnown RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 HTR2CP28335 458 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 RPS27AP62979 156 aaKnown RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 UBA52P62987 128 aaKnown RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 NXNL2Q5VZ03 156 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 FCRLAQ7L513 359 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 SLC43A2Q8N370 569 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 OR52I1Q8NGK6 324 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 OR6F1Q8NGZ6 308 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 GIMAP1Q8WWP7 306 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 OR1E3Q8WZA6 343 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 NMNAT2Q9BZQ4 307 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 WWTR1Q9GZV5 400 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 GCM1Q9NP62 436 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 PIGLQ9Y2B2 252 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 TMEM221A6NGB7 291 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 GPR137BO60478 399 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 SELENOFO60613 162 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 IL1AP01583 271 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 TK1P04183 234 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 HEXAP06865 529 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 GM2AP17900 193 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 RAB4AP20338 218 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 HTR1FP30939 366 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 P2RX1P51575 399 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 CCR5P51681 352 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 SEMA3BQ13214 749 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 SPCS2Q15005 226 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 TBCEQ15813 527 aaPredicted RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 FAM71E1Q6IPT2 247 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 ABHD17CQ6PCB6 329 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 PIWIL3Q7Z3Z3 882 aaKnown RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 LILRA3Q8N6C8 439 aaPredicted RBP8.05□□□□□ -1.12
PTCD3-201ENST00000254630 OR14K1Q8NGZ2 314 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 ELMOD3Q96FG2 381 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 NMNAT3Q96T66 252 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 AMBRA1Q9C0C7 1298 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 ACKR4Q9NPB9 350 aa8.05□□□□□ -1.12
PTCD3-201ENST00000254630 A0A1B0GWA3 101 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 OR6C6A6NF89 314 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 TMEM202A6NGA9 273 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 F8W036 122 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 GIFP27352 417 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 BLOC1S1P78537 153 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 FOXK2Q01167 660 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 SLC35D3Q5M8T2 416 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 LYPD4Q6UWN0 246 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 PARP16Q8N5Y8 322 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 BCORP1Q8N888 145 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 ANKRD19PQ9H560 264 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 HRASLSQ9HDD0 168 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 PADI1Q9ULC6 663 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 TMEM72A0PK05 275 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 LRIT2A6NDA9 550 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 LRRC30A6NM36 301 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 FAM166BA8MTA8 275 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 IL3RAP26951 378 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 CATR1Q13166 79 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 SLC14A1Q13336 389 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 ALKBH1Q13686 389 aaKnown RBP8.04□□□□□ -1.12
PTCD3-201ENST00000254630 SLC9A3R2Q15599 337 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 OR2G6Q5TZ20 316 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 MFSD12Q6NUT3 480 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 WDR88Q6ZMY6 472 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 RASD2Q96D21 266 aa8.04□□□□□ -1.12
PTCD3-201ENST00000254630 PFDN5Q99471 154 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms