RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ARL6IP5O75915 188 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 BCHEP06276 602 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 CDK2P24941 298 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 IL2RGP31785 369 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 SLC6A12P48065 614 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 SRSF5Q13243 272 aaKnown RBP11.95□□□□□ -0.5
MSH2-201ENST00000233146 PCGF3Q3KNV8 242 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 GFI1BQ5VTD9 330 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 FAM46CQ5VWP2 391 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 RPTNQ6XPR3 784 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 ZNF664Q8N3J9 261 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 OR4E2Q8NGC2 313 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 OR6J1Q8NGC5 347 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 GPR148Q8TDV2 347 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 OR8D1Q8WZ84 308 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 ZNF558Q96NG5 402 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 TMEM39BQ9GZU3 492 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 POFUT1Q9H488 388 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 EXO5Q9H790 373 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 HINT3Q9NQE9 182 aaKnown RBP11.95□□□□□ -0.5
MSH2-201ENST00000233146 GAB2Q9UQC2 676 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 A0A087WUJ7 227 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 TEX13DA0A0J9YY54 714 aaPredicted RBP11.95□□□□□ -0.5
MSH2-201ENST00000233146 TBC1D3BA6NDS4 549 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 H7C417 338 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 TBC1D3HP0C7X1 549 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 ZNF84P51523 738 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 RPS15P62841 145 aaKnown RBP11.95□□□□□ -0.5
MSH2-201ENST00000233146 TSPAN31Q12999 210 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 CHIT1Q13231 466 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 TMEM35AQ53FP2 167 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 TBC1D3GQ6DHY5 549 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 LINC01465Q8N7H1 131 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 C15orf40Q8WUR7 153 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 CCDC107Q8WV48 283 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 SECTM1Q8WVN6 248 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 ZNF426Q9BUY5 554 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 ZFYVE1Q9HBF4 777 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 FAM212BQ9NTI7 297 aaPredicted RBP11.95□□□□□ -0.5
MSH2-201ENST00000233146 MTFP1Q9UDX5 166 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 PRSS21Q9Y6M0 314 aa11.95□□□□□ -0.5
MSH2-201ENST00000233146 A0A1W2PPE2 198 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 ZNF587BE7ETH6 402 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 PHOX2AO14813 284 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 PPP1R2P9O14990 202 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 SLC2A10O95528 541 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 ETHE1O95571 254 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 ITGB2P05107 769 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 CHRM4P08173 479 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 RAB40ALP0C0E4 278 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 EPCAMP16422 314 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 RPS10P46783 165 aaKnown RBP11.94□□□□□ -0.5
MSH2-201ENST00000233146 TAS2R20P59543 309 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 COMTD1Q86VU5 262 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 CPOQ8IVL8 374 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 SYNPRQ8TBG9 265 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 RAB40AQ8WXH6 277 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 SLC25A36Q96CQ1 311 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 TMEM19Q96HH6 336 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 SEC22AQ96IW7 307 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 BOCQ9BWV1 1114 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 A4GALTQ9NPC4 353 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 RLFQ13129 1914 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 SLC5A10A0PJK1 596 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 M0R036 132 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 MELTFP08582 738 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 CD22P20273 847 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 CD1CP29017 333 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 PCBP4P57723 403 aaKnown RBP11.94□□□□□ -0.5
MSH2-201ENST00000233146 ZNHIT3Q15649 155 aaPredicted RBP11.94□□□□□ -0.5
MSH2-201ENST00000233146 STPG1Q5TH74 334 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 MRM1Q6IN84 353 aaKnown RBP11.94□□□□□ -0.5
MSH2-201ENST00000233146 PWWP2BQ6NUJ5 590 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 TNFAIP8L2Q6P589 184 aaPredicted RBP11.94□□□□□ -0.5
MSH2-201ENST00000233146 FRRS1Q6ZNA5 592 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 LRRTM4Q86VH4 590 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 ACBD4Q8NC06 268 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 HAVCR1Q96D42 359 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 GFI1Q99684 422 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 ACTRT3Q9BYD9 372 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 ATG5Q9H1Y0 275 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 CSNK1G1Q9HCP0 422 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 POT1Q9NUX5 634 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 CALML5Q9NZT1 146 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 PRODH2Q9UF12 536 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 NOD1Q9Y239 953 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 TMED3Q9Y3Q3 217 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 DRGXA6NNA5 263 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 M0R3H8 397 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 PRAMEF11O60813 436 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 PGAM2P15259 253 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 ZNF7P17097 686 aaPredicted RBP11.94□□□□□ -0.5
MSH2-201ENST00000233146 TDGF1P3P51864 188 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 TUSC3Q13454 348 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 DCAF10Q5QP82 559 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 BTNL8Q6UX41 500 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 TRAM1L1Q8N609 369 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 SLC22A14Q9Y267 594 aa11.94□□□□□ -0.5
MSH2-201ENST00000233146 IFITM5A6NNB3 132 aa11.93□□□□□ -0.5
MSH2-201ENST00000233146 GPR32O75388 356 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms