RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 KAT7O95251 611 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 MT-ND5P03915 603 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 ATF1P18846 271 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 NDUFS1P28331 727 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 GJA4P35212 333 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 DUSP8Q13202 625 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 EXOSC7Q15024 291 aaKnown RBP8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 TP53I3Q53FA7 332 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 TANGO2Q6ICL3 276 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 TMEM17Q86X19 198 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 OR2L13Q8N349 312 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 TMEM52Q8NDY8 209 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 OR4K14Q8NGD5 310 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 PHOSPHO2Q8TCD6 241 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 MAP3K3Q99759 626 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 NDC1Q9BTX1 674 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 TGIF2Q9GZN2 237 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 IL21RQ9HBE5 538 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 CMC2Q9NRP2 79 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 COA4Q9NYJ1 87 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 WSB2Q9NYS7 404 aaPredicted RBP8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 MYEF2Q9P2K5 600 aaKnown RBP8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 CA5BQ9Y2D0 317 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 AK6Q9Y3D8 172 aaKnown RBP8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 TBC1D3KA0A087X1G2 549 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 A0A1W2PQU0 124 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 MEIS3P1A6NDR6 274 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 TBC1D3FA6NER0 549 aaPredicted RBP8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 AGPAT2O15120 278 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 SUSD5O60279 629 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 PRAMEF2O60811 474 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 RBMS1P29558 406 aaKnown RBP8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 IGFALSP35858 605 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 PGDP52209 483 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 GMFBP60983 142 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 SEC61A1P61619 476 aaKnown RBP8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 BDH1Q02338 343 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 SGCAQ16586 387 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 TBC1D3GQ6DHY5 549 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 PUSL1Q8N0Z8 303 aaKnown RBP8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 PHOSPHO1Q8TCT1 267 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 LCN9Q8WX39 176 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 SMPDL3BQ92485 455 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 PTCHD1Q96NR3 888 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 TNFRSF13CQ96RJ3 184 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 TIMM29Q9BSF4 260 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 SARGQ9BW04 601 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 CHRDQ9H2X0 955 aa8.63□□□□□ -1.03
HLA-DOA-201ENST00000229829 GXYLT2A0PJZ3 443 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 PRR19A6NJB7 356 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 A8MXK9 166 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 IMPA2O14732 288 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 SC5DO75845 299 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 LIPCP11150 499 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 LAMP2P13473 410 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 GALP22466 123 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 PTGFRP43088 359 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 MAGEB1P43366 347 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 LUMP51884 338 aaPredicted RBP8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 PDGFRLQ15198 375 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 DCST2Q5T1A1 773 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 AVPI1Q5T686 147 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 H3F3CQ6NXT2 135 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 ASPGQ86U10 573 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 RANBP3LQ86VV4 465 aaPredicted RBP8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 OR5T2Q8NGG2 359 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 OR5T3Q8NGG3 340 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 OR1S1Q8NH92 325 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 OR14C36Q8NHC7 312 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 THAP4Q8WY91 577 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 SMARCD2Q92925 531 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 SLC25A28Q96A46 364 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 RAB11FIP5Q9BXF6 653 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 NOX3Q9HBY0 568 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 NDRG3Q9UGV2 375 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 LOC100509620A0A075B734 347 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 SULT1C2O00338 296 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 NGFRP08138 427 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 NFYBP25208 207 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 PPT1P50897 306 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 SEC13P55735 322 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 SRSF5Q13243 272 aaKnown RBP8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 SGCGQ13326 291 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 MANEAQ5SRI9 462 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 PXKQ7Z7A4 578 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 TMED4Q7Z7H5 227 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 CDH26Q8IXH8 852 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 SLC44A3Q8N4M1 653 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 ZNRF4Q8WWF5 429 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 GAL3ST3Q96A11 431 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 S100PBPQ96BU1 408 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 ZMYND19Q96E35 227 aaPredicted RBP8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 MICU1Q9BPX6 476 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 RSRP1Q9BUV0 290 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 ZNF350Q9GZX5 532 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 FN3KQ9H479 309 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 CACYBPQ9HB71 228 aaKnown RBP8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 GHRLQ9UBU3 117 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 SLC17A4Q9Y2C5 497 aa8.62□□□□□ -1.03
HLA-DOA-201ENST00000229829 CACNA1IQ9P0X4 2223 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms