RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 LRRC20Q8TCA0 184 aa14.85□□□□□ -0.03
LTBR-201ENST00000228918 SORCS2Q96PQ0 1159 aa14.85□□□□□ -0.03
LTBR-201ENST00000228918 TSPAN10Q9H1Z9 355 aaPredicted RBP14.85□□□□□ -0.03
LTBR-201ENST00000228918 OR10A5Q9H207 317 aa14.85□□□□□ -0.03
LTBR-201ENST00000228918 NKIRAS2Q9NYR9 191 aa14.85□□□□□ -0.03
LTBR-201ENST00000228918 KLHL9Q9P2J3 617 aa14.85□□□□□ -0.03
LTBR-201ENST00000228918 SCP2D1Q9UJQ7 156 aa14.85□□□□□ -0.03
LTBR-201ENST00000228918 HIF3AQ9Y2N7 669 aa14.85□□□□□ -0.03
LTBR-201ENST00000228918 V9GY05 133 aa14.85□□□□□ -0.03
LTBR-201ENST00000228918 TP53BP1Q12888 1972 aaPredicted RBP14.84□□□□□ -0.03
LTBR-201ENST00000228918 A0A087WV48 116 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 OR2W5A6NFC9 320 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 AQP2P41181 271 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 SLC25A1P53007 311 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 CLDN12P56749 244 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 MRPS21P82921 87 aaKnown RBP14.84□□□□□ -0.03
LTBR-201ENST00000228918 FUT7Q11130 342 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 LGALSLQ3ZCW2 172 aaPredicted RBP14.84□□□□□ -0.03
LTBR-201ENST00000228918 ELFN2Q5R3F8 820 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 SFRP4Q6FHJ7 346 aaPredicted RBP14.84□□□□□ -0.03
LTBR-201ENST00000228918 FAM122BQ7Z309 247 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 ZNF440Q8IYI8 595 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 EID2Q8N6I1 236 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 ZNF511Q8NB15 262 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 FAM71CQ8NEG0 241 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 CCDC120Q96HB5 630 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 CCNL2Q96S94 520 aaPredicted RBP14.84□□□□□ -0.03
LTBR-201ENST00000228918 GPR174Q9BXC1 333 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 SPRTNQ9H040 489 aaPredicted RBP14.84□□□□□ -0.03
LTBR-201ENST00000228918 NANSQ9NR45 359 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 TMEM131Q92545 1883 aa14.84□□□□□ -0.03
LTBR-201ENST00000228918 TCRBV21S2A2A0A5A6 115 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 BLACEA4D250 179 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 NAP1L6A6NFF2 107 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 ELOA3DA6NLF2 546 aaPredicted RBP14.83□□□□□ -0.03
LTBR-201ENST00000228918 C10orf142B7Z368 130 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 G3V3Q6 166 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 TRIM77I1YAP6 450 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 PRAF2O60831 178 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 KRT33AO76009 404 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 SEMA4FO95754 770 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 TGM6O95932 706 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 PSMB1P20618 241 aaKnown RBP14.83□□□□□ -0.03
LTBR-201ENST00000228918 PTGS2P35354 604 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 PTH2RP49190 550 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 ZNF74Q16587 644 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 ELOA3BQ3SY89 546 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 KLHL26Q53HC5 615 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 PXDC1Q5TGL8 231 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 STPG1Q5TH74 334 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 PWWP2BQ6NUJ5 590 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 SLC16A9Q7RTY1 509 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 JAZF1Q86VZ6 243 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 SDR16C5Q8N3Y7 309 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 LRRC75AQ8NAA5 344 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 ELOA3Q8NG57 546 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 OR6C4Q8NGE1 309 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 ZNF436Q9C0F3 470 aaPredicted RBP14.83□□□□□ -0.03
LTBR-201ENST00000228918 OR5V1Q9UGF6 321 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 ZNF346Q9UL40 294 aaKnown RBP14.83□□□□□ -0.03
LTBR-201ENST00000228918 FLVCR2Q9UPI3 526 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 FOXJ3Q9UPW0 622 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 KLHDC2Q9Y2U9 406 aa14.83□□□□□ -0.03
LTBR-201ENST00000228918 TDRD6O60522 2096 aaKnown RBP14.83□□□□□ -0.04
LTBR-201ENST00000228918 CACNA1IQ9P0X4 2223 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 BLOC1S5-TXNDC5H3BN57 136 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 SULT1B1O43704 296 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 SCO1O75880 301 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 IGF2P01344 180 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 CD14P08571 375 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 OR8G3PP0DMU2 310 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 GABRG2P18507 467 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 EN2P19622 333 aaPredicted RBP14.83□□□□□ -0.04
LTBR-201ENST00000228918 MAOAP21397 527 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 GRK6P43250 576 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 VEGFCP49767 419 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 AP3S2P59780 193 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 SKP1P63208 163 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 RPL6Q02878 288 aaKnown RBP14.83□□□□□ -0.04
LTBR-201ENST00000228918 WBP2NLQ6ICG8 309 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 ATG4DQ86TL0 474 aaPredicted RBP14.83□□□□□ -0.04
LTBR-201ENST00000228918 SERPINA12Q8IW75 414 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 ZNF615Q8N8J6 731 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 GATSQ8NAP1 163 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 LSM14AQ8ND56 463 aaKnown RBP14.83□□□□□ -0.04
LTBR-201ENST00000228918 LIPHQ8WWY8 451 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 NXPE2Q96DL1 559 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 TSSK2Q96PF2 358 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 LMF1Q96S06 567 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 AIFM2Q9BRQ8 373 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 MRI1Q9BV20 369 aa14.83□□□□□ -0.04
LTBR-201ENST00000228918 TMEM72A0PK05 275 aa14.82□□□□□ -0.04
LTBR-201ENST00000228918 PRAMEF26H0Y7S4 382 aa14.82□□□□□ -0.04
LTBR-201ENST00000228918 UPK3AO75631 287 aa14.82□□□□□ -0.04
LTBR-201ENST00000228918 CLPSP04118 112 aa14.82□□□□□ -0.04
LTBR-201ENST00000228918 IGHV4-34P06331 123 aa14.82□□□□□ -0.04
LTBR-201ENST00000228918 CALCBP10092 127 aa14.82□□□□□ -0.04
LTBR-201ENST00000228918 APEHP13798 732 aaKnown RBP14.82□□□□□ -0.04
LTBR-201ENST00000228918 DRD1P21728 446 aa14.82□□□□□ -0.04
LTBR-201ENST00000228918 SELENOPP49908 381 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms