RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 SCRG1O75711 98 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 ITPKBP27987 946 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 SLC26A5P58743 744 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 IDNKQ5T6J7 187 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 EEF1A1P5Q5VTE0 462 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 AGAP6Q5VW22 663 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 C16orf47Q6ZP98 133 aaPredicted RBP17.34■□□□□ 0.37
YBX3-201ENST00000228251 CDC20BQ86Y33 519 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 UBQLNLQ8IYU4 475 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 HGDQ93099 445 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 MRPL48Q96GC5 212 aaKnown RBP17.34■□□□□ 0.37
YBX3-201ENST00000228251 AGAP4Q96P64 663 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.34■□□□□ 0.37
YBX3-201ENST00000228251 RXFP3Q9NSD7 469 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 NPAP1Q9NZP6 1156 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 GNG8Q9UK08 70 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 RARRES3Q9UL19 164 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 RASD1Q9Y272 281 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 TMED7Q9Y3B3 224 aa17.34■□□□□ 0.37
YBX3-201ENST00000228251 GMFGO60234 142 aa17.33■□□□□ 0.37
YBX3-201ENST00000228251 SUSD5O60279 629 aa17.33■□□□□ 0.37
YBX3-201ENST00000228251 GATBO75879 557 aaKnown RBP17.33■□□□□ 0.37
YBX3-201ENST00000228251 ABHD16AO95870 558 aa17.33■□□□□ 0.37
YBX3-201ENST00000228251 EFR3AQ14156 821 aa17.33■□□□□ 0.37
YBX3-201ENST00000228251 SGCBQ16585 318 aa17.33■□□□□ 0.37
YBX3-201ENST00000228251 GRINAQ7Z429 371 aa17.33■□□□□ 0.37
YBX3-201ENST00000228251 LRRC28Q86X40 367 aaPredicted RBP17.33■□□□□ 0.37
YBX3-201ENST00000228251 MISPQ8IVT2 679 aa17.33■□□□□ 0.37
YBX3-201ENST00000228251 RDH10Q8IZV5 341 aa17.33■□□□□ 0.37
YBX3-201ENST00000228251 OR6V1Q8N148 313 aa17.33■□□□□ 0.37
YBX3-201ENST00000228251 MAFAQ8NHW3 353 aaPredicted RBP17.33■□□□□ 0.37
YBX3-201ENST00000228251 SPSB2Q99619 263 aa17.33■□□□□ 0.37
YBX3-201ENST00000228251 KCNJ15Q99712 375 aa17.33■□□□□ 0.37
YBX3-201ENST00000228251 SLC22A4Q9H015 551 aa17.33■□□□□ 0.37
YBX3-201ENST00000228251 GRHPRQ9UBQ7 328 aa17.33■□□□□ 0.37
YBX3-201ENST00000228251 ANKRD61A6NGH8 418 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 FAM171A2A8MVW0 826 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 CPNE3O75131 537 aaKnown RBP17.33■□□□□ 0.36
YBX3-201ENST00000228251 DXOO77932 396 aaKnown RBP17.33■□□□□ 0.36
YBX3-201ENST00000228251 HEXBP07686 556 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 FAM157BP0CG42 384 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 NANOS3P60323 173 aaKnown RBP17.33■□□□□ 0.36
YBX3-201ENST00000228251 DCDP81605 110 aaKnown RBP17.33■□□□□ 0.36
YBX3-201ENST00000228251 SLC25A35Q3KQZ1 300 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 MAMDC2Q7Z304 686 aaPredicted RBP17.33■□□□□ 0.36
YBX3-201ENST00000228251 MAML2Q8IZL2 1156 aaPredicted RBP17.33■□□□□ 0.36
YBX3-201ENST00000228251 Q8N402 240 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 ZNF519Q8TB69 540 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 STK35Q8TDR2 534 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 DUSP19Q8WTR2 217 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 RGP1Q92546 391 aaPredicted RBP17.33■□□□□ 0.36
YBX3-201ENST00000228251 NAT6Q93015 286 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 SNX18Q96RF0 628 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 NDEL1Q9GZM8 345 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 SLC26A1Q9H2B4 701 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 WDR70Q9NW82 654 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 TAS2R10Q9NYW0 307 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 MALT1Q9UDY8 824 aa17.33■□□□□ 0.36
YBX3-201ENST00000228251 TRBV2A0A0J9YWF9 115 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 YKT6O15498 198 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 UPK3AO75631 287 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 SERPINI2O75830 405 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 HIST1H2ABP04908 130 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 EIF4EP06730 217 aaKnown RBP17.32■□□□□ 0.36
YBX3-201ENST00000228251 EDNRAP25101 427 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 PSMB10P40306 273 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 EIF2B2P49770 351 aaKnown RBP17.32■□□□□ 0.36
YBX3-201ENST00000228251 TPTEP56180 551 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 FAM69AQ5T7M9 428 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 TMEM205Q6UW68 189 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 HIST3H2AQ7L7L0 130 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 ZBTB8BQ8NAP8 495 aaPredicted RBP17.32■□□□□ 0.36
YBX3-201ENST00000228251 OR2T4Q8NH00 348 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 PHYHIPQ92561 330 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 HIST1H2ACQ93077 130 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 ZC3HAV1LQ96H79 300 aaKnown RBP17.32■□□□□ 0.36
YBX3-201ENST00000228251 MAP6Q96JE9 813 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 PDCD1LG2Q9BQ51 273 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 SLC7A5P2Q9GIP4 190 aa17.32■□□□□ 0.36
YBX3-201ENST00000228251 MRM2Q9UI43 246 aaKnown RBP17.32■□□□□ 0.36
YBX3-201ENST00000228251 A8MVM7 634 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 FTCDNL1E5RQL4 147 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 H7C1C5 153 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 IGHMP01871 453 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 SLC2A2P11168 524 aaPredicted RBP17.31■□□□□ 0.36
YBX3-201ENST00000228251 RAB3BP20337 219 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 NPR2P20594 1047 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 HTR3AP46098 478 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 OR2B6P58173 313 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 LCN6P62502 163 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 MADCAM1Q13477 382 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 CARTPTQ16568 116 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 COL28A1Q2UY09 1125 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 C1orf140Q5VVS0 124 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 SLC6A19Q695T7 634 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 LCN10Q6JVE6 187 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 PAPD4Q6PIY7 484 aaKnown RBP17.31■□□□□ 0.36
YBX3-201ENST00000228251 KCTD20Q7Z5Y7 419 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 AKAP14Q86UN6 197 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 DEFB123Q8N688 67 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms