RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 HSD17B8Q92506 261 aa20■□□□□ 0.79
SMARCD2-201ENST00000225742 RNF166Q96A37 237 aaPredicted RBP20■□□□□ 0.79
SMARCD2-201ENST00000225742 ADIPOR1Q96A54 375 aa20■□□□□ 0.79
SMARCD2-201ENST00000225742 ING4Q9UNL4 249 aa20■□□□□ 0.79
SMARCD2-201ENST00000225742 V9GY05 133 aa20■□□□□ 0.79
SMARCD2-201ENST00000225742 A0A0B4J203 849 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 PHYHO14832 338 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 ZNF780AO75290 641 aaPredicted RBP19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 ECDO95905 644 aaPredicted RBP19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 PPM1FP49593 454 aaPredicted RBP19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 EGR4Q05215 589 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 ALKBH1Q13686 389 aaKnown RBP19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 ELAVL1Q15717 326 aaKnown RBP19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 FAM69AQ5T7M9 428 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 TIGD4Q8IY51 512 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 CMTM4Q8IZR5 234 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 ZNF563Q8TA94 476 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 C15orf40Q8WUR7 153 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 LPAR4Q99677 370 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 OR51J1Q9H342 316 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 CCDC86Q9H6F5 360 aaKnown RBP19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 CLEC4AQ9UMR7 237 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 MRPS7Q9Y2R9 242 aaKnown RBP19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 TMEM14AQ9Y6G1 99 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 A0A1W2PQD3 144 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 ANKRD34BA5PLL1 514 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 TRABD2BA6NFA1 517 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 NAP1L6A6NFF2 107 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 LMO7DNF2Z398 122 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 EIF4E2O60573 245 aaKnown RBP19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 ZFPL1O95159 310 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 RAB40ALP0C0E4 278 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 DPP4P27487 766 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 NANOS3P60323 173 aaKnown RBP19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 MRPS10P82664 201 aaKnown RBP19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 LTBQ06643 244 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 RPL18Q07020 188 aaKnown RBP19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 FCN2Q15485 313 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 Q499Y3 187 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 C14orf28Q4W4Y0 310 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 FAM199XQ6PEV8 388 aaPredicted RBP19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 CBLN3Q6UW01 205 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 APOOLQ6UXV4 268 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 ZNF511Q8NB15 262 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 ZNF721Q8TF20 911 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 RLN3Q8WXF3 142 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 DEDD2Q8WXF8 326 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 RAB40AQ8WXH6 277 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 KLHL15Q96M94 604 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 GFI1Q99684 422 aa19.99■□□□□ 0.79
SMARCD2-201ENST00000225742 COL5A1P20908 1838 aaPredicted RBP19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 A0A1B0GVT2 93 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 TO15178 435 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 UPK3AO75631 287 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 OR2B3O76000 313 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 DDAH2O95865 285 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 MST1P26927 711 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 GIFP27352 417 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 TACR3P29371 465 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 AP3S2P59780 193 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 EGR3Q06889 387 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 SNTB2Q13425 540 aaKnown RBP19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 BTBD16Q32M84 506 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 ZNF767PQ75MW2 155 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 FAM160A2Q8N612 972 aaPredicted RBP19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 ZNF321PQ8N8H1 164 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 OR5AK2Q8NH90 309 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 RGP1Q92546 391 aaPredicted RBP19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 MAP6Q96JE9 813 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 OR8D2Q9GZM6 311 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 RANBP3Q9H6Z4 567 aaPredicted RBP19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 MRM2Q9UI43 246 aaKnown RBP19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 ETV7Q9Y603 341 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 RNF215Q9Y6U7 377 aa19.98■□□□□ 0.79
SMARCD2-201ENST00000225742 TRAV6A0A075B6T7 132 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 TRBV5-5A0A0J9YX44 114 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 TMEM72A0PK05 275 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 H3BMH7 237 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 CDC40O60508 579 aaKnown RBP eCLIP19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 ALX3O95076 343 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 ABHD16AO95870 558 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 H2AFB2P0C5Z0 115 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 SRFP11831 508 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 MNDAP41218 407 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 HNRNPKP61978 463 aaKnown RBP eCLIP19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 CADM4Q8NFZ8 388 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 OR56B4Q8NH76 319 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 THRSPQ92748 146 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 YIPF2Q9BWQ6 316 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 WDR76Q9H967 626 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 A6NL46 340 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 RHPN2P1A8MT19 583 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 PRR32B1ATL7 298 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 GABARAPH6UMI1 98 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 RAF1P04049 648 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 SCAND1P57086 179 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 SNAP47Q5SQN1 464 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 EEF1A1P5Q5VTE0 462 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 FAM205BPQ63HN1 556 aa19.97■□□□□ 0.79
SMARCD2-201ENST00000225742 LRRN1Q6UXK5 716 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms