RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 KCTD20Q7Z5Y7 419 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 OR5AS1Q8N127 324 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 FBXL6Q8N531 539 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 STEAP2Q8NFT2 490 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 OR7G2Q8NG99 324 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 SLC19A3Q9BZV2 496 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 GNG12Q9UBI6 72 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 MSL3P1P0C860 447 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 RPS18P62269 152 aaKnown RBP16.99■□□□□ 0.31
CLIP2-201ENST00000223398 SLC10A1Q14973 349 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 RPL22L1Q6P5R6 122 aaKnown RBP16.99■□□□□ 0.31
CLIP2-201ENST00000223398 FBXW12Q6X9E4 464 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 H1FNTQ75WM6 255 aaPredicted RBP16.99■□□□□ 0.31
CLIP2-201ENST00000223398 SLC35A4Q96G79 324 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 SEMA4GQ9NTN9 838 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 F5P12259 2224 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 DPY19L2P1Q6NXN4 242 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 GPR155Q7Z3F1 870 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 FAM83FQ8NEG4 500 aaPredicted RBP16.99■□□□□ 0.31
CLIP2-201ENST00000223398 NICN1Q9BSH3 213 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 NTNG1Q9Y2I2 539 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 KLF13Q9Y2Y9 288 aaPredicted RBP16.99■□□□□ 0.31
CLIP2-201ENST00000223398 SLC22A5O76082 557 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 NXPH2O95156 264 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 IL2RAP01589 272 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 CXADRP78310 365 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 IL10RAQ13651 578 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 SF3A2Q15428 464 aaKnown RBP16.99■□□□□ 0.31
CLIP2-201ENST00000223398 FCRLAQ7L513 359 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 SLC15A4Q8N697 577 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 WDR76Q9H967 626 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 FSCN3Q9NQT6 498 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 SSC5DA1L4H1 1573 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 CDHR4A6H8M9 788 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 ZNF705EA8MWA4 302 aaPredicted RBP16.99■□□□□ 0.31
CLIP2-201ENST00000223398 LMO7DNF2Z398 122 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 AKAIN1P0CW23 69 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 CD22P20273 847 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 HTRA4P83105 476 aaPredicted RBP16.99■□□□□ 0.31
CLIP2-201ENST00000223398 TBC1D28Q2M2D7 210 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 PRTGQ2VWP7 1150 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 GUSBP11Q6P575 273 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 OR4D6Q8NGJ1 314 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 STACQ99469 402 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 TEX101Q9BY14 249 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 ZNF355PQ9NSJ1 428 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 EHFQ9NZC4 300 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 MOKQ9UQ07 419 aa16.99■□□□□ 0.31
CLIP2-201ENST00000223398 PRAMEF27A3QJZ7 478 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 CSF1P09603 554 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 ADH6P28332 368 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 HTR4Q13639 388 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 C1orf210Q8IVY1 113 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 PIGTQ969N2 578 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 Q96M85 177 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 DPCDQ9BVM2 203 aaPredicted RBP16.98■□□□□ 0.31
CLIP2-201ENST00000223398 FAM234AQ9H0X4 552 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 TAS2R16Q9NYV7 291 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 CNOT2Q9NZN8 540 aaKnown RBP16.98■□□□□ 0.31
CLIP2-201ENST00000223398 C19orf53Q9UNZ5 99 aaPredicted RBP16.98■□□□□ 0.31
CLIP2-201ENST00000223398 M0R082 166 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 ARPC1BO15143 372 aaKnown RBP16.98■□□□□ 0.31
CLIP2-201ENST00000223398 FGL1Q08830 312 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 PRAMEF9Q5VWM5 478 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 FAIMQ9NVQ4 179 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 COA3Q9Y2R0 106 aaPredicted RBP16.98■□□□□ 0.31
CLIP2-201ENST00000223398 GABRPO00591 440 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 ICOSLGO75144 302 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 MSR1P21757 451 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 MEP1BQ16820 701 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 DPY19L2P2Q6ZN68 376 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 SLC46A3Q7Z3Q1 461 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 NIPSNAP1Q9BPW8 284 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 WWTR1Q9GZV5 400 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 RP1L1Q8IWN7 2480 aaPredicted RBP16.98■□□□□ 0.31
CLIP2-201ENST00000223398 CAMLGP49069 296 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 LILRA6Q6PI73 481 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 DCXRQ7Z4W1 244 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 OR11A1Q9GZK7 315 aa16.98■□□□□ 0.31
CLIP2-201ENST00000223398 PIGBOS1A0A0B4J2F0 54 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 SULF2Q8IWU5 870 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 MRPL41Q8IXM3 137 aaKnown RBP16.97■□□□□ 0.31
CLIP2-201ENST00000223398 OR6V1Q8N148 313 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 ABHD11Q8NFV4 315 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 THAP7Q9BT49 309 aaPredicted RBP16.97■□□□□ 0.31
CLIP2-201ENST00000223398 CCDC32Q9BV29 185 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 PPP1R14DQ9NXH3 145 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 CHRNA9Q9UGM1 479 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 ECM29Q5VYK3 1845 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 EIF4E2O60573 245 aaKnown RBP16.97■□□□□ 0.31
CLIP2-201ENST00000223398 CD14P08571 375 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 GAAP10253 952 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 ACVR1Q04771 509 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 MYBPHQ13203 477 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 MPEG1Q2M385 716 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 NKAIN4Q8IVV8 208 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 MCRIP1C9JLW8 97 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 H3BMQ9 156 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 GM2AP17900 193 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 ESCO2Q56NI9 601 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms