RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 OR2A12Q8NGT7 310 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 SMPDL3AQ92484 453 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 ZBTB8AQ96BR9 441 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 S100A13Q99584 98 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 HMGN4O00479 90 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 C8orf89P0DMQ9 161 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 SRMP19623 302 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 SLC6A12P48065 614 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 NRG3P56975 720 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 FKBP1BP68106 108 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 KCNAB1Q14722 419 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 NFATC4Q14934 902 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 CST9Q5W186 159 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 HIST2H3AQ71DI3 136 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 REC114Q7Z4M0 266 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 MCHR1Q99705 422 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 ZNF559Q9BR84 538 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 MAN2C1Q9NTJ4 1040 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 V9GY05 133 aa13.49□□□□□ -0.25
PTPRA-201ENST00000216877 C7orf77A4D0Y5 90 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 SNRPCP09234 159 aaKnown RBP13.48□□□□□ -0.25
PTPRA-201ENST00000216877 SPARCP09486 303 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 TAS2R43P59537 309 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 EIF2B1Q14232 305 aaKnown RBP13.48□□□□□ -0.25
PTPRA-201ENST00000216877 AWAT1Q58HT5 328 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 GID4Q8IVV7 300 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 OR14K1Q8NGZ2 314 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 OR8D1Q8WZ84 308 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 PDFQ9HBH1 243 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 TAAR2Q9P1P5 351 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 RIIAD1A6NNX1 92 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 FAM171A2A8MVW0 826 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 NPC1O15118 1278 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 BRINP1O60477 761 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 AKR1C4P17516 323 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 MAPK3P27361 379 aaPredicted RBP13.48□□□□□ -0.25
PTPRA-201ENST00000216877 GJA4P35212 333 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 ACTR1BP42025 376 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 TCEAL6Q6IPX3 200 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 APCDD1Q8J025 514 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 LINC00471Q8N535 108 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 MORN4Q8NDC4 146 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 OR5K2Q8NHB8 316 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 DTD1Q8TEA8 209 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 CPNE4Q96A23 557 aaPredicted RBP13.48□□□□□ -0.25
PTPRA-201ENST00000216877 VOPP1Q96AW1 172 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 ZG16BQ96DA0 208 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 OR52D1Q9H346 318 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 SPACA1Q9HBV2 294 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 CAPN10Q9HC96 672 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 ZDHHC3Q9NYG2 299 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 CARHSP1Q9Y2V2 147 aaKnown RBP13.48□□□□□ -0.25
PTPRA-201ENST00000216877 MCM3APO60318 1980 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 NYNRINQ9P2P1 1898 aaKnown RBP13.48□□□□□ -0.25
PTPRA-201ENST00000216877 IFITM5A6NNB3 132 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 KDELR3O43731 214 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 LILRB5O75023 590 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 RAB3DO95716 219 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 FABP4P15090 132 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 ZNF25P17030 456 aaPredicted RBP13.48□□□□□ -0.25
PTPRA-201ENST00000216877 PDHA2P29803 388 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 NUBP1P53384 320 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 ZNF616Q08AN1 781 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 NOGQ13253 232 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 BIKQ13323 160 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 SMAD4Q13485 552 aaKnown RBP13.48□□□□□ -0.25
PTPRA-201ENST00000216877 AKR1C8PQ5T2L2 129 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 ZNF683Q8IZ20 524 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 OR4C6Q8NH72 309 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 PHOSPHO2Q8TCD6 241 aa13.48□□□□□ -0.25
PTPRA-201ENST00000216877 KRCC1Q9NPI7 259 aaPredicted RBP13.48□□□□□ -0.25
PTPRA-201ENST00000216877 RCC2Q9P258 522 aaKnown RBP13.48□□□□□ -0.25
PTPRA-201ENST00000216877 PUS1Q9Y606 427 aaKnown RBP eCLIP13.48□□□□□ -0.25
PTPRA-201ENST00000216877 C4orf17Q53FE4 359 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 SLC25A30Q5SVS4 291 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 GRHL2Q6ISB3 625 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 GDF6Q6KF10 455 aaPredicted RBP13.47□□□□□ -0.25
PTPRA-201ENST00000216877 PRSS55Q6UWB4 352 aaPredicted RBP13.47□□□□□ -0.25
PTPRA-201ENST00000216877 RFLNBQ8N5W9 214 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 SCAMP4Q969E2 229 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 LMF1Q96S06 567 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 ATG5Q9H1Y0 275 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 NRIP3Q9NQ35 241 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 PLPP2O43688 288 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 IGHA1P01876 353 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 ZNF84P51523 738 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 CRYBB1P53674 252 aaPredicted RBP13.47□□□□□ -0.25
PTPRA-201ENST00000216877 ADAM8P78325 824 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 RELQ04864 619 aaPredicted RBP13.47□□□□□ -0.25
PTPRA-201ENST00000216877 PARGQ86W56 976 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 TEAD3Q99594 435 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 SYT4Q9H2B2 425 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 TMEM27Q9HBJ8 222 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 GSKIPQ9P0R6 139 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 UPB1Q9UBR1 384 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 SLC23A2Q9UGH3 650 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 ZNF726A6NNF4 738 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 IDSB3KWA1 339 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 H7C0S8 307 aa13.47□□□□□ -0.25
PTPRA-201ENST00000216877 FGBP02675 491 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms