RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Amdhd2Q8JZV7 409 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Eps8l3Q91WL0 600 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ccnl2Q9JJA7 518 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm13124A2A752 406 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm8220F6YKI2 213 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ptpn20O55082 426 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Htr1bP28334 386 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Mmp2P33434 662 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Opn1swP51491 346 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Atxn1P54254 791 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm7030Q0WXH6 285 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Mfsd12Q3U481 476 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Eif4e1bQ3UTA9 244 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vrk1Q80X41 440 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Adam30Q811Q3 732 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ikzf5Q8BU00 419 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rad51ap1Q8C551 337 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vmn1r228Q8R2A7 333 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gpn1Q8VCE2 372 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr461Q8VF30 313 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 PsphQ99LS3 225 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rassf1Q99MK9 340 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 CrtapQ9CYD3 400 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rhox2aQ9D4Y3 191 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Prl8a6Q9DAY2 240 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cpn2Q9DBB9 547 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cyp11a1Q9QZ82 526 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr1315-ps1A0A140LI66 314 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr1205A2ATJ7 307 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gpld1O70362 837 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Znf703P0CL69 594 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Pax4P32115 349 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Fut4Q11127 433 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Pon2Q62086 354 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Zfp763Q8BIC7 588 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Lkaaear1Q8BIG2 198 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Pias2Q8C5D8 621 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr1316Q8VG12 314 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr539Q8VGL9 319 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Sfxn5Q925N0 342 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Q9CPZ3 230 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ranbp3Q9CT10 491 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Orc5Q9WUV0 435 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Kcnd3Q9Z0V1 655 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr550E9Q544 316 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Dynlrb1P62627 96 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Map3k8Q07174 467 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tsr3Q5HZH2 323 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 4930512M02RikQ5SQK8 218 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vamp1Q62442 118 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Timd4Q6U7R4 343 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr1161Q7TR29 321 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Upp2Q8CGR7 320 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Kctd11Q8K485 232 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gtf2f2Q8R0A0 249 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Klrb1fQ8VD98 217 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ucn3Q924A4 164 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Emc3Q99KI3 261 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slc15a1Q9JIP7 709 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tp73Q9JJP2 631 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Fiz1Q9WTJ4 500 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Mapk11Q9WUI1 364 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Phf1Q9Z1B8 559 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Syngr4Q9Z1L2 233 aa10.98□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tmem229aB9EJI9 371 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Kbtbd7G5E8C2 690 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vmn1r170K7N6W9 304 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Hoxc4Q08624 264 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tigd2Q0VBL1 525 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ppp5cQ60676 499 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Lix1lQ8BQ89 337 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Calhm5Q8R100 309 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr935Q8VG16 308 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slco6d1Q9D5W6 683 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 1810010D01RikA0A1L1SR87 51 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Atp1b1P14094 304 aaKnown RBP10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rpl7P14148 270 aaKnown RBP10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Klk1b11P15946 261 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Fndc9Q8BJN4 226 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Pfn4Q9D6I3 129 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr653E9PVA0 317 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Esp36G3UZD8 160 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Mmp12P34960 473 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rpl18P35980 188 aaKnown RBP10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gng8P63078 70 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Lemd1Q14C37 129 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tmprss11bQ14C59 416 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slco4c1Q8BGD4 722 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Thoc3Q8VE80 351 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ddah2Q99LD8 285 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Dpep3Q9DA79 493 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm7233E9PZI8 198 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vmn2r107E9PZJ7 861 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm9732F6QVC4 198 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm21820J3KMU2 361 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm8104K7N744 198 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 IlkO55222 452 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 ChrneP20782 493 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr18Q0VAX9 331 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tmem217Q14AF1 189 aa10.97□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms